Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017813.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX72621 | Canola | nucleus | 94.34 | 94.34 |
| CDX75635 | Canola | nucleus | 81.89 | 72.58 |
| CDY44045 | Canola | nucleus | 77.74 | 72.28 |
| CDY22442 | Canola | nucleus | 73.58 | 70.91 |
| CDX69287 | Canola | nucleus | 79.25 | 68.63 |
| CDY38933 | Canola | nucleus | 67.17 | 60.96 |
| CDX89554 | Canola | nucleus | 66.42 | 60.07 |
| CDX83109 | Canola | nucleus | 33.96 | 55.56 |
| CDY12830 | Canola | nucleus | 49.43 | 51.78 |
| CDY01420 | Canola | nucleus | 50.94 | 51.33 |
| CDY30608 | Canola | nucleus | 50.57 | 50.57 |
| CDY57355 | Canola | nucleus | 50.57 | 48.2 |
| KRH28419 | Soybean | nucleus | 53.58 | 47.81 |
| CDY23023 | Canola | nucleus | 51.7 | 47.24 |
| KRH57983 | Soybean | nucleus | 52.45 | 47.12 |
| KRH77058 | Soybean | nucleus | 53.58 | 46.56 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 54.72 | 46.47 |
| CDY02098 | Canola | nucleus | 50.94 | 46.08 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 53.96 | 45.69 |
| CDY43567 | Canola | nucleus | 36.98 | 45.16 |
| PGSC0003DMT400008569 | Potato | nucleus | 50.19 | 41.56 |
| Zm00001d005300_P001 | Maize | nucleus | 44.15 | 41.05 |
| Solyc04g078420.1.1 | Tomato | nucleus | 50.19 | 40.55 |
| Os09t0106700-01 | Rice | nucleus | 47.55 | 39.5 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 49.81 | 39.4 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 49.43 | 38.99 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 49.43 | 38.19 |
| Zm00001d019712_P001 | Maize | nucleus | 49.06 | 37.68 |
| CDX68566 | Canola | nucleus | 43.77 | 36.94 |
| EER98550 | Sorghum | nucleus | 48.68 | 35.25 |
| CDX83108 | Canola | cytosol | 4.91 | 33.33 |
| CDY21728 | Canola | nucleus | 19.25 | 32.48 |
| CDY35992 | Canola | nucleus | 18.87 | 31.85 |
| HORVU5Hr1G049880.1 | Barley | plastid | 49.43 | 30.9 |
| CDX83880 | Canola | nucleus | 19.25 | 28.02 |
| CDX72988 | Canola | nucleus | 21.89 | 25.66 |
| CDX96475 | Canola | nucleus | 21.89 | 25.44 |
| CDY71713 | Canola | nucleus | 21.89 | 25.22 |
| CDY07907 | Canola | nucleus | 31.32 | 25.0 |
| CDX73963 | Canola | nucleus | 31.32 | 24.78 |
| CDX72405 | Canola | nucleus | 22.26 | 24.48 |
| CDX82074 | Canola | nucleus | 21.51 | 24.46 |
| CDY58312 | Canola | nucleus | 21.51 | 24.36 |
| CDY46114 | Canola | nucleus | 21.89 | 24.07 |
| CDX68977 | Canola | nucleus | 22.64 | 24.0 |
| CDX75353 | Canola | nucleus | 22.64 | 23.9 |
| CDY28302 | Canola | nucleus | 22.64 | 23.9 |
| CDY44415 | Canola | nucleus | 22.64 | 22.99 |
| CDX81853 | Canola | nucleus | 21.13 | 22.67 |
| CDX72208 | Canola | nucleus | 30.94 | 22.28 |
| CDY20494 | Canola | nucleus | 30.94 | 22.28 |
| CDY27271 | Canola | nucleus | 31.32 | 22.25 |
| CDY30264 | Canola | nucleus | 21.51 | 21.92 |
| CDY21727 | Canola | nucleus | 20.75 | 21.91 |
| CDY69058 | Canola | nucleus | 21.51 | 21.59 |
| CDX96742 | Canola | nucleus | 19.62 | 21.49 |
| CDY07345 | Canola | nucleus | 24.15 | 21.48 |
| CDY16884 | Canola | nucleus | 24.91 | 21.15 |
| CDY67868 | Canola | nucleus | 23.77 | 21.14 |
| CDY20004 | Canola | nucleus | 22.64 | 20.91 |
| CDY66025 | Canola | nucleus | 22.64 | 20.83 |
| CDX70776 | Canola | nucleus | 24.53 | 20.77 |
| CDX78761 | Canola | nucleus | 24.53 | 20.77 |
| CDY67808 | Canola | nucleus | 12.45 | 20.75 |
| CDY02687 | Canola | nucleus | 24.15 | 20.65 |
| CDX85443 | Canola | nucleus | 23.77 | 20.52 |
| CDY38460 | Canola | nucleus | 24.91 | 20.37 |
| CDX95921 | Canola | nucleus | 24.53 | 20.31 |
| CDX74825 | Canola | nucleus | 30.57 | 20.2 |
| CDY40941 | Canola | nucleus | 24.15 | 20.0 |
| CDY66170 | Canola | nucleus | 22.26 | 18.79 |
| CDY70773 | Canola | nucleus | 19.62 | 18.18 |
| CDY70901 | Canola | nucleus | 19.25 | 17.83 |
| CDY50737 | Canola | nucleus | 23.02 | 17.73 |
| CDY46444 | Canola | nucleus | 23.02 | 17.28 |
| CDY44993 | Canola | nucleus | 23.02 | 17.28 |
| CDX74436 | Canola | nucleus | 21.13 | 15.51 |
Protein Annotations
| EnsemblPlants:CDY29542 | EnsemblPlantsGene:GSBRNA2T00043250001 | Gene3D:1.10.10.60 | GO:A0A078GWL3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY29542 | ProteinID:CDY29542.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002540CDE | UniProt:A0A078GWL3 | MapMan:15.5.2.1 | : |
Description
BnaA03g53870DBnaA03g53870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWL3]
Coordinates
chrLK032239:+:123909..124706
Molecular Weight (calculated)
28951.0 Da
IEP (calculated)
6.151
GRAVY (calculated)
-0.626
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPSRKNME RIKGPWSPEE DDLLQKVVEE HGPRNWSLIS KSIPARSGKS CRLRWCNQLS PEVEHRGFSA EEDETIVRAH ARYGNKWATI SRLLSGRTDN
101: AVKNHWNSTL KRKCTPEGYD GNLGEGQPSK RAASGGVCTG LYISPGSPAG SDVSASDGGD PPTYLSLSLP WNNGCDTETV GINGDTVIDG GYTAELFPVR
201: KEEERGIVGG EFMTAVQEMI RTEVRSYMAE LQRGDVGGGL CMPQSVNSCR VGLREFIVNQ IGKME
101: AVKNHWNSTL KRKCTPEGYD GNLGEGQPSK RAASGGVCTG LYISPGSPAG SDVSASDGGD PPTYLSLSLP WNNGCDTETV GINGDTVIDG GYTAELFPVR
201: KEEERGIVGG EFMTAVQEMI RTEVRSYMAE LQRGDVGGGL CMPQSVNSCR VGLREFIVNQ IGKME
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
Arabidopsis Description
AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.