Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46444 | Canola | nucleus | 85.47 | 83.29 |
| CDY44993 | Canola | nucleus | 84.88 | 82.72 |
| AT1G26780.2 | Thale cress | nucleus | 82.56 | 79.11 |
| CDY67868 | Canola | nucleus | 50.58 | 58.39 |
| CDY07345 | Canola | nucleus | 50.0 | 57.72 |
| CDY40941 | Canola | nucleus | 52.33 | 56.25 |
| CDX95921 | Canola | nucleus | 51.74 | 55.62 |
| CDY35992 | Canola | nucleus | 24.71 | 54.14 |
| CDY21728 | Canola | nucleus | 24.13 | 52.87 |
| CDX83880 | Canola | nucleus | 25.0 | 47.25 |
| CDX96475 | Canola | nucleus | 28.78 | 43.42 |
| CDX72988 | Canola | nucleus | 28.49 | 43.36 |
| CDX82074 | Canola | nucleus | 29.36 | 43.35 |
| CDY58312 | Canola | nucleus | 29.36 | 43.16 |
| Os08t0435700-00 | Rice | nucleus | 31.98 | 42.64 |
| CDX96742 | Canola | nucleus | 28.78 | 40.91 |
| CDX81853 | Canola | nucleus | 28.78 | 40.08 |
| CDY21727 | Canola | nucleus | 29.07 | 39.84 |
| CDY44415 | Canola | nucleus | 28.78 | 37.93 |
| CDY71713 | Canola | nucleus | 25.0 | 37.39 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 37.21 | 36.16 |
| CDY28302 | Canola | nucleus | 26.16 | 35.86 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 31.4 | 35.76 |
| CDX72405 | Canola | nucleus | 25.0 | 35.68 |
| CDX75353 | Canola | nucleus | 25.87 | 35.46 |
| CDY30264 | Canola | nucleus | 26.74 | 35.38 |
| CDX68977 | Canola | nucleus | 25.58 | 35.2 |
| CDY46114 | Canola | nucleus | 24.42 | 34.85 |
| CDY16884 | Canola | nucleus | 31.1 | 34.29 |
| CDY67808 | Canola | nucleus | 15.7 | 33.96 |
| CDX85443 | Canola | nucleus | 30.23 | 33.88 |
| CDY02687 | Canola | nucleus | 30.52 | 33.87 |
| CDY69058 | Canola | nucleus | 25.87 | 33.71 |
| CDY20004 | Canola | nucleus | 27.91 | 33.45 |
| CDY38460 | Canola | nucleus | 31.4 | 33.33 |
| CDY66025 | Canola | nucleus | 27.62 | 32.99 |
| CDX83109 | Canola | nucleus | 15.41 | 32.72 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 33.43 | 32.49 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 33.43 | 32.49 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 33.43 | 32.49 |
| CDX70776 | Canola | nucleus | 29.07 | 31.95 |
| CDX78761 | Canola | nucleus | 29.07 | 31.95 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 42.15 | 31.73 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 35.17 | 31.68 |
| KRH50566 | Soybean | nucleus | 40.12 | 31.65 |
| Solyc05g007870.1.1 | Tomato | nucleus | 38.08 | 31.41 |
| PGSC0003DMT400047415 | Potato | nucleus | 38.37 | 30.77 |
| CDY66170 | Canola | nucleus | 27.91 | 30.57 |
| KRH74887 | Soybean | plastid | 39.24 | 29.03 |
| KRH70748 | Soybean | nucleus | 39.24 | 28.91 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 31.98 | 28.8 |
| KRG89586 | Soybean | nucleus | 40.12 | 28.4 |
| CDX74436 | Canola | nucleus | 27.03 | 25.76 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 34.88 | 25.53 |
| CDY12830 | Canola | nucleus | 18.6 | 25.3 |
| CDY01420 | Canola | nucleus | 18.9 | 24.71 |
| CDY30608 | Canola | nucleus | 18.31 | 23.77 |
| CDY57355 | Canola | nucleus | 19.19 | 23.74 |
| CDY29542 | Canola | nucleus | 17.73 | 23.02 |
| CDX72621 | Canola | nucleus | 17.44 | 22.64 |
| CDY22442 | Canola | nucleus | 18.02 | 22.55 |
| CDY23023 | Canola | nucleus | 18.9 | 22.41 |
| CDY02098 | Canola | nucleus | 18.9 | 22.18 |
| CDX75635 | Canola | nucleus | 19.19 | 22.07 |
| CDY38933 | Canola | nucleus | 18.6 | 21.92 |
| CDX69287 | Canola | nucleus | 19.19 | 21.57 |
| CDX89554 | Canola | nucleus | 18.31 | 21.5 |
| CDY44045 | Canola | nucleus | 17.73 | 21.4 |
| CDY07907 | Canola | nucleus | 19.19 | 19.88 |
| CDX68566 | Canola | nucleus | 18.02 | 19.75 |
| CDX73963 | Canola | nucleus | 19.19 | 19.7 |
| CDY27271 | Canola | nucleus | 21.22 | 19.57 |
| CDX72208 | Canola | nucleus | 20.93 | 19.57 |
| CDY20494 | Canola | nucleus | 20.64 | 19.29 |
| CDX74825 | Canola | nucleus | 21.22 | 18.2 |
| CDY43567 | Canola | nucleus | 11.34 | 17.97 |
| OQU80507 | Sorghum | nucleus | 35.17 | 17.72 |
| CDY70901 | Canola | nucleus | 10.47 | 12.59 |
| CDY70773 | Canola | nucleus | 10.47 | 12.59 |
| Os08t0435725-00 | Rice | cytosol | 2.03 | 7.0 |
| CDX83108 | Canola | cytosol | 0.29 | 2.56 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078ILC5 | UniProt:A0A078ILC5 | EnsemblPlants:CDY50737 | ProteinID:CDY50737 |
| ProteinID:CDY50737.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00097415001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF3B9E | SEG:seg |
Description
BnaC05g51000DBnaC05g51000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILC5]
Coordinates
chrLK032935:-:89707..91062
Molecular Weight (calculated)
39629.6 Da
IEP (calculated)
8.083
GRAVY (calculated)
-0.762
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENEIAAAR REASSWNFPF NDINIQLHRR CNTSHEFDIL KSPFGVNEEE SNNHNPNYSN SESGKKETTD SGQSWSSSSS KPSVLGRGHW RPAEDVKLKE
101: LVAIYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW HVIMARKYRE HSSAYRRRKL
201: IINNPLKPHL PNHPSPNCPS FISTKHYFTR PFHEFNLTHH LVNHASMTTD QNHLVLPFHC FQGYESTEAP MVVGMFGNQM MIEDNVGATS EALYNFPYVD
301: SMSQGKGVPN EAMNLIGMEV VDEEVAKKAK QQPHFFDFLS LGTA
101: LVAIYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW HVIMARKYRE HSSAYRRRKL
201: IINNPLKPHL PNHPSPNCPS FISTKHYFTR PFHEFNLTHH LVNHASMTTD QNHLVLPFHC FQGYESTEAP MVVGMFGNQM MIEDNVGATS EALYNFPYVD
301: SMSQGKGVPN EAMNLIGMEV VDEEVAKKAK QQPHFFDFLS LGTA
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.