Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01420 | Canola | nucleus | 93.68 | 90.11 |
| Bra012149.1-P | Field mustard | nucleus | 92.09 | 78.72 |
| AT5G67300.1 | Thale cress | nucleus | 88.14 | 73.11 |
| CDY43567 | Canola | nucleus | 55.73 | 64.98 |
| CDX83109 | Canola | nucleus | 37.94 | 59.26 |
| CDY30608 | Canola | nucleus | 59.29 | 56.6 |
| CDY57355 | Canola | nucleus | 62.06 | 56.47 |
| CDY23023 | Canola | nucleus | 62.85 | 54.83 |
| CDY02098 | Canola | nucleus | 62.85 | 54.27 |
| KRH61351 | Soybean | nucleus | 52.57 | 51.35 |
| CDY29542 | Canola | nucleus | 51.78 | 49.43 |
| CDX72621 | Canola | nucleus | 51.38 | 49.06 |
| CDY22442 | Canola | nucleus | 52.96 | 48.73 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 51.78 | 48.7 |
| KRH05621 | Soybean | nucleus | 50.99 | 48.13 |
| KRH15420 | Soybean | nucleus | 51.38 | 47.62 |
| CDY44045 | Canola | nucleus | 53.36 | 47.37 |
| CDY38933 | Canola | nucleus | 53.75 | 46.58 |
| CDX89554 | Canola | nucleus | 53.75 | 46.42 |
| CDX75635 | Canola | nucleus | 54.15 | 45.82 |
| CDX69287 | Canola | nucleus | 55.34 | 45.75 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 50.59 | 45.39 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 50.59 | 43.24 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 49.01 | 43.06 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 45.06 | 42.86 |
| Zm00001d005300_P001 | Maize | nucleus | 48.22 | 42.81 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 48.62 | 42.41 |
| CDX68566 | Canola | nucleus | 52.17 | 42.04 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 47.43 | 41.67 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 49.41 | 41.39 |
| CDX83108 | Canola | cytosol | 6.32 | 41.03 |
| Os09t0106700-01 | Rice | nucleus | 51.38 | 40.75 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 47.83 | 40.74 |
| VIT_03s0180g00210.t01 | Wine grape | nucleus | 46.64 | 38.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.69 | 38.16 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 50.2 | 37.91 |
| Zm00001d019712_P001 | Maize | nucleus | 51.38 | 37.68 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 49.8 | 37.5 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 50.2 | 37.03 |
| EER98550 | Sorghum | nucleus | 50.99 | 35.25 |
| CDY21728 | Canola | nucleus | 21.34 | 34.39 |
| CDY35992 | Canola | nucleus | 20.95 | 33.76 |
| CDX83880 | Canola | nucleus | 21.74 | 30.22 |
| HORVU5Hr1G049880.1 | Barley | plastid | 49.01 | 29.25 |
| CDX72988 | Canola | nucleus | 25.69 | 28.76 |
| CDX96475 | Canola | nucleus | 25.69 | 28.51 |
| CDX82074 | Canola | nucleus | 25.3 | 27.47 |
| CDY58312 | Canola | nucleus | 24.9 | 26.92 |
| CDY71713 | Canola | nucleus | 23.72 | 26.09 |
| CDX72405 | Canola | nucleus | 24.11 | 25.31 |
| CDY44415 | Canola | nucleus | 26.09 | 25.29 |
| CDY46114 | Canola | nucleus | 23.72 | 24.9 |
| CDX96742 | Canola | nucleus | 23.72 | 24.79 |
| CDY28302 | Canola | nucleus | 24.11 | 24.3 |
| CDX81853 | Canola | nucleus | 23.72 | 24.29 |
| CDX68977 | Canola | nucleus | 23.72 | 24.0 |
| CDX75353 | Canola | nucleus | 23.72 | 23.9 |
| CDY21727 | Canola | nucleus | 23.72 | 23.9 |
| CDY07907 | Canola | nucleus | 31.23 | 23.8 |
| CDX73963 | Canola | nucleus | 31.23 | 23.58 |
| CDY30264 | Canola | nucleus | 24.11 | 23.46 |
| CDX72208 | Canola | nucleus | 33.99 | 23.37 |
| CDY27271 | Canola | nucleus | 34.39 | 23.32 |
| CDY20494 | Canola | nucleus | 33.2 | 22.83 |
| CDY07345 | Canola | nucleus | 26.48 | 22.48 |
| CDY20004 | Canola | nucleus | 25.3 | 22.3 |
| CDY66025 | Canola | nucleus | 25.3 | 22.22 |
| CDY67868 | Canola | nucleus | 26.09 | 22.15 |
| CDY67808 | Canola | nucleus | 13.83 | 22.01 |
| CDX95921 | Canola | nucleus | 26.88 | 21.25 |
| CDY69058 | Canola | nucleus | 22.13 | 21.21 |
| CDX74825 | Canola | nucleus | 33.2 | 20.95 |
| CDX85443 | Canola | nucleus | 25.3 | 20.85 |
| CDY02687 | Canola | nucleus | 25.3 | 20.65 |
| CDY40941 | Canola | nucleus | 26.09 | 20.62 |
| CDY16884 | Canola | nucleus | 25.3 | 20.51 |
| CDY66170 | Canola | nucleus | 25.3 | 20.38 |
| CDY38460 | Canola | nucleus | 25.69 | 20.06 |
| CDX78761 | Canola | nucleus | 24.51 | 19.81 |
| CDX70776 | Canola | nucleus | 24.51 | 19.81 |
| CDY50737 | Canola | nucleus | 25.3 | 18.6 |
| CDY44993 | Canola | nucleus | 25.3 | 18.13 |
| CDY46444 | Canola | nucleus | 25.3 | 18.13 |
| CDX74436 | Canola | nucleus | 24.11 | 16.9 |
| CDY70901 | Canola | nucleus | 18.58 | 16.43 |
| CDY70773 | Canola | nucleus | 18.58 | 16.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078FEM1 | UniProt:A0A078FEM1 | EnsemblPlants:CDY12830 | ProteinID:CDY12830 |
| ProteinID:CDY12830.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00070464001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF691 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF320C | SEG:seg |
Description
BnaC07g16030DBnaC07g16030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEM1]
Coordinates
chrLK032027:+:483812..484907
Molecular Weight (calculated)
28035.5 Da
IEP (calculated)
10.268
GRAVY (calculated)
-0.552
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRIKGPWS PEEDEQLRKL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGF YAPAEDQRPV KRSVFKPVPR AGGVTLPLPI ETSSFCDDPA TSLSLSLPGA DSTSNNTLMR HNTNTMSFKQ FSGGFRGAIE DMGRSFAGNG
201: VEFMAVVQEM IKAEVRSYMA EMQRNHNGGG FVVGGFRDKG MIPMSQIGVG RIE
101: STLKRKCGGF YAPAEDQRPV KRSVFKPVPR AGGVTLPLPI ETSSFCDDPA TSLSLSLPGA DSTSNNTLMR HNTNTMSFKQ FSGGFRGAIE DMGRSFAGNG
201: VEFMAVVQEM IKAEVRSYMA EMQRNHNGGG FVVGGFRDKG MIPMSQIGVG RIE
001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
Arabidopsis Description
MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.