Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12830 | Canola | nucleus | 90.11 | 93.68 |
| Bra012149.1-P | Field mustard | nucleus | 97.72 | 86.82 |
| AT5G67300.1 | Thale cress | nucleus | 88.59 | 76.39 |
| CDY43567 | Canola | nucleus | 55.89 | 67.74 |
| CDX83109 | Canola | nucleus | 36.12 | 58.64 |
| CDY30608 | Canola | nucleus | 57.79 | 57.36 |
| CDY57355 | Canola | nucleus | 60.08 | 56.83 |
| CDY23023 | Canola | nucleus | 61.6 | 55.86 |
| CDY02098 | Canola | nucleus | 61.6 | 55.29 |
| CDY29542 | Canola | nucleus | 51.33 | 50.94 |
| KRH61351 | Soybean | nucleus | 49.81 | 50.58 |
| CDX72621 | Canola | nucleus | 50.95 | 50.57 |
| CDY22442 | Canola | nucleus | 52.09 | 49.82 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 50.57 | 49.44 |
| CDY44045 | Canola | nucleus | 52.85 | 48.77 |
| KRH05621 | Soybean | nucleus | 48.67 | 47.76 |
| CDY38933 | Canola | nucleus | 52.85 | 47.6 |
| CDX89554 | Canola | nucleus | 52.85 | 47.44 |
| KRH15420 | Soybean | nucleus | 49.05 | 47.25 |
| CDX69287 | Canola | nucleus | 54.75 | 47.06 |
| CDX75635 | Canola | nucleus | 53.23 | 46.82 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 49.81 | 46.45 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 44.49 | 43.98 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 48.67 | 43.24 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 47.53 | 43.1 |
| Zm00001d005300_P001 | Maize | nucleus | 46.39 | 42.81 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 48.67 | 42.38 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 46.39 | 42.36 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 46.39 | 42.36 |
| CDX68566 | Canola | nucleus | 50.19 | 42.04 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 47.15 | 41.75 |
| CDX83108 | Canola | cytosol | 6.08 | 41.03 |
| Os09t0106700-01 | Rice | nucleus | 49.43 | 40.75 |
| VIT_03s0180g00210.t01 | Wine grape | nucleus | 45.25 | 39.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.44 | 38.52 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 48.67 | 38.21 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 48.29 | 37.8 |
| Zm00001d019712_P001 | Maize | nucleus | 49.05 | 37.39 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 48.67 | 37.32 |
| EER98550 | Sorghum | nucleus | 48.67 | 34.97 |
| CDY21728 | Canola | nucleus | 20.53 | 34.39 |
| CDY35992 | Canola | nucleus | 20.15 | 33.76 |
| CDX83880 | Canola | nucleus | 20.91 | 30.22 |
| HORVU5Hr1G049880.1 | Barley | plastid | 47.53 | 29.48 |
| CDX72988 | Canola | nucleus | 24.71 | 28.76 |
| CDX96475 | Canola | nucleus | 24.71 | 28.51 |
| CDX82074 | Canola | nucleus | 24.33 | 27.47 |
| CDY58312 | Canola | nucleus | 23.95 | 26.92 |
| CDY71713 | Canola | nucleus | 22.81 | 26.09 |
| CDX72405 | Canola | nucleus | 23.19 | 25.31 |
| CDY44415 | Canola | nucleus | 25.1 | 25.29 |
| CDY46114 | Canola | nucleus | 22.81 | 24.9 |
| CDX96742 | Canola | nucleus | 22.81 | 24.79 |
| CDY28302 | Canola | nucleus | 23.19 | 24.3 |
| CDX81853 | Canola | nucleus | 22.81 | 24.29 |
| CDY07907 | Canola | nucleus | 30.42 | 24.1 |
| CDX68977 | Canola | nucleus | 22.81 | 24.0 |
| CDY21727 | Canola | nucleus | 22.81 | 23.9 |
| CDX75353 | Canola | nucleus | 22.81 | 23.9 |
| CDX73963 | Canola | nucleus | 30.42 | 23.88 |
| CDX72208 | Canola | nucleus | 33.08 | 23.64 |
| CDY27271 | Canola | nucleus | 33.46 | 23.59 |
| CDY30264 | Canola | nucleus | 23.19 | 23.46 |
| CDY20494 | Canola | nucleus | 32.32 | 23.1 |
| CDY20004 | Canola | nucleus | 24.33 | 22.3 |
| CDY66025 | Canola | nucleus | 24.33 | 22.22 |
| CDY07345 | Canola | nucleus | 25.1 | 22.15 |
| CDY67808 | Canola | nucleus | 13.31 | 22.01 |
| CDY67868 | Canola | nucleus | 24.71 | 21.81 |
| CDY69058 | Canola | nucleus | 21.29 | 21.21 |
| CDX74825 | Canola | nucleus | 32.32 | 21.2 |
| CDY02687 | Canola | nucleus | 24.71 | 20.97 |
| CDX95921 | Canola | nucleus | 25.48 | 20.94 |
| CDX85443 | Canola | nucleus | 24.33 | 20.85 |
| CDY16884 | Canola | nucleus | 24.71 | 20.83 |
| CDY66170 | Canola | nucleus | 24.33 | 20.38 |
| CDY38460 | Canola | nucleus | 25.1 | 20.37 |
| CDY40941 | Canola | nucleus | 24.71 | 20.31 |
| CDX78761 | Canola | nucleus | 23.57 | 19.81 |
| CDX70776 | Canola | nucleus | 23.57 | 19.81 |
| CDY50737 | Canola | nucleus | 24.71 | 18.9 |
| CDY46444 | Canola | nucleus | 24.33 | 18.13 |
| CDY44993 | Canola | nucleus | 24.33 | 18.13 |
| CDX74436 | Canola | nucleus | 23.19 | 16.9 |
| CDY70901 | Canola | nucleus | 18.25 | 16.78 |
| CDY70773 | Canola | nucleus | 18.25 | 16.78 |
Protein Annotations
| EnsemblPlants:CDY01420 | EnsemblPlantsGene:GSBRNA2T00112416001 | Gene3D:1.10.10.60 | GO:A0A078EH50 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY01420 | ProteinID:CDY01420.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDB8F4 | MapMan:15.5.2.1 | : |
Description
BnaA07g11930D
Coordinates
chrLK031926:-:948749..949909
Molecular Weight (calculated)
29011.3 Da
IEP (calculated)
9.581
GRAVY (calculated)
-0.638
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRIKGPWS PEEDEQLRKL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGF YASAEDQRPV KRSVFKPVPR AGGVMLPLPI ETSTFCDDPA TSLSLSLPGA DVSEESNRSH ESTNNNTSRS HNTNTMSLMQ FSGGFRGAIE
201: EMGRSFGGNG GEFMAVVQEM IKAEVRSYMA EMQRNHSGGG FVGGGFRDNG MIPMSQVGVG RIE
101: STLKRKCGGF YASAEDQRPV KRSVFKPVPR AGGVMLPLPI ETSTFCDDPA TSLSLSLPGA DVSEESNRSH ESTNNNTSRS HNTNTMSLMQ FSGGFRGAIE
201: EMGRSFGGNG GEFMAVVQEM IKAEVRSYMA EMQRNHSGGG FVGGGFRDNG MIPMSQVGVG RIE
001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
Arabidopsis Description
MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.