Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07345 | Canola | nucleus | 97.65 | 97.65 |
| CDX95921 | Canola | nucleus | 77.18 | 71.88 |
| CDY40941 | Canola | nucleus | 76.51 | 71.25 |
| AT1G69560.2 | Thale cress | nucleus | 72.82 | 62.72 |
| CDY35992 | Canola | nucleus | 27.52 | 52.23 |
| CDY50737 | Canola | nucleus | 58.39 | 50.58 |
| CDY21728 | Canola | nucleus | 26.51 | 50.32 |
| CDY46444 | Canola | nucleus | 59.06 | 49.86 |
| CDY44993 | Canola | nucleus | 58.05 | 49.01 |
| CDX83880 | Canola | nucleus | 27.52 | 45.05 |
| Os08t0435700-00 | Rice | nucleus | 35.23 | 40.7 |
| CDX96475 | Canola | nucleus | 30.54 | 39.91 |
| CDX72988 | Canola | nucleus | 30.2 | 39.82 |
| CDX82074 | Canola | nucleus | 30.87 | 39.48 |
| CDY58312 | Canola | nucleus | 30.87 | 39.32 |
| CDX96742 | Canola | nucleus | 31.54 | 38.84 |
| CDY44415 | Canola | nucleus | 32.55 | 37.16 |
| CDY21727 | Canola | nucleus | 31.21 | 37.05 |
| CDY71713 | Canola | nucleus | 28.52 | 36.96 |
| CDX81853 | Canola | nucleus | 30.54 | 36.84 |
| CDY30264 | Canola | nucleus | 30.87 | 35.38 |
| CDY28302 | Canola | nucleus | 29.19 | 34.66 |
| CDX68977 | Canola | nucleus | 28.86 | 34.4 |
| CDX75353 | Canola | nucleus | 28.86 | 34.26 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 33.89 | 33.44 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 39.6 | 33.33 |
| CDY67808 | Canola | nucleus | 17.79 | 33.33 |
| CDY20004 | Canola | nucleus | 31.88 | 33.1 |
| CDY16884 | Canola | nucleus | 34.23 | 32.69 |
| CDY69058 | Canola | nucleus | 28.86 | 32.58 |
| CDY66025 | Canola | nucleus | 31.21 | 32.29 |
| CDY38460 | Canola | nucleus | 34.9 | 32.1 |
| CDX83109 | Canola | nucleus | 17.45 | 32.1 |
| CDX72405 | Canola | nucleus | 25.84 | 31.95 |
| CDX78761 | Canola | nucleus | 33.56 | 31.95 |
| CDX70776 | Canola | nucleus | 33.56 | 31.95 |
| CDX85443 | Canola | nucleus | 32.89 | 31.92 |
| CDY02687 | Canola | nucleus | 32.89 | 31.61 |
| CDY46114 | Canola | nucleus | 25.17 | 31.12 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 36.58 | 30.79 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 36.58 | 30.79 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 36.24 | 30.51 |
| Solyc05g007870.1.1 | Tomato | nucleus | 41.95 | 29.98 |
| CDY66170 | Canola | nucleus | 31.54 | 29.94 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 38.26 | 29.84 |
| KRH50566 | Soybean | nucleus | 43.29 | 29.59 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 44.97 | 29.32 |
| PGSC0003DMT400047415 | Potato | nucleus | 41.95 | 29.14 |
| KRH70748 | Soybean | nucleus | 42.95 | 27.41 |
| KRH74887 | Soybean | plastid | 42.62 | 27.31 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 33.89 | 26.44 |
| KRG89586 | Soybean | nucleus | 42.62 | 26.13 |
| CDY12830 | Canola | nucleus | 22.15 | 26.09 |
| CDX74436 | Canola | nucleus | 30.54 | 25.21 |
| CDY01420 | Canola | nucleus | 21.81 | 24.71 |
| CDY29542 | Canola | nucleus | 21.14 | 23.77 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 37.25 | 23.62 |
| CDX72621 | Canola | nucleus | 20.81 | 23.4 |
| CDY30608 | Canola | nucleus | 20.81 | 23.4 |
| CDY57355 | Canola | nucleus | 21.81 | 23.38 |
| CDY23023 | Canola | nucleus | 22.48 | 23.1 |
| CDY02098 | Canola | nucleus | 22.48 | 22.87 |
| CDY38933 | Canola | nucleus | 22.15 | 22.6 |
| CDY22442 | Canola | nucleus | 20.81 | 22.55 |
| CDX89554 | Canola | nucleus | 21.81 | 22.18 |
| CDY44045 | Canola | nucleus | 20.81 | 21.75 |
| CDX75635 | Canola | nucleus | 21.81 | 21.74 |
| CDX69287 | Canola | nucleus | 21.81 | 21.24 |
| CDY07907 | Canola | nucleus | 21.81 | 19.58 |
| CDX72208 | Canola | nucleus | 24.16 | 19.57 |
| CDY27271 | Canola | nucleus | 24.16 | 19.3 |
| CDX68566 | Canola | nucleus | 20.13 | 19.11 |
| CDX73963 | Canola | nucleus | 21.48 | 19.1 |
| CDY20494 | Canola | nucleus | 22.48 | 18.21 |
| CDY43567 | Canola | nucleus | 13.09 | 17.97 |
| CDX74825 | Canola | nucleus | 23.49 | 17.46 |
| OQU80507 | Sorghum | nucleus | 38.93 | 16.98 |
| CDY70901 | Canola | nucleus | 11.07 | 11.54 |
| CDY70773 | Canola | nucleus | 11.07 | 11.54 |
| Os08t0435725-00 | Rice | cytosol | 2.35 | 7.0 |
| CDX83108 | Canola | cytosol | 0.67 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY67868 | EnsemblPlantsGene:GSBRNA2T00067589001 | Gene3D:1.10.10.60 | GO:A0A078JK27 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY67868 | ProteinID:CDY67868.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE01F3 | UniProt:A0A078JK27 | MapMan:15.5.2.1 | : |
Description
BnaC06g43380DBnaC06g43380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK27]
Coordinates
chrLK036596:+:854..1926
Molecular Weight (calculated)
34648.0 Da
IEP (calculated)
9.521
GRAVY (calculated)
-0.882
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEDHRRWMD QTASCGYFSL DISNYQHSGH SYASHREEEI KDPNQSNYGK RSKKETRVCG SFRHSSKASV VRGHWRPAED AKLKKLVALD GPQNWNLIAE
101: KLQGRSAGKS CRLRWFNQLD PRINRRAFSE EEEQRLMQAH NLYGNKWAMI ARFFPGRTDN SVKNHWHVIM ARKFREQSSV YRRRKTVIPL KPLVNPNPQY
201: SCNDFDPSRS DTIHLVSNDK NHLMLPIPCF PGYAHGNESP LMLGMLENQM MVDDHSARTR EATTFDFLNQ TEKCEMLGEG MNEQKKPHFF DFLGLGTV
101: KLQGRSAGKS CRLRWFNQLD PRINRRAFSE EEEQRLMQAH NLYGNKWAMI ARFFPGRTDN SVKNHWHVIM ARKFREQSSV YRRRKTVIPL KPLVNPNPQY
201: SCNDFDPSRS DTIHLVSNDK NHLMLPIPCF PGYAHGNESP LMLGMLENQM MVDDHSARTR EATTFDFLNQ TEKCEMLGEG MNEQKKPHFF DFLGLGTV
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.