Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003995.1-P | Field mustard | nucleus | 99.66 | 100.0 |
| CDY67868 | Canola | nucleus | 97.65 | 97.65 |
| CDX95921 | Canola | nucleus | 76.51 | 71.25 |
| CDY40941 | Canola | nucleus | 75.84 | 70.62 |
| AT1G69560.2 | Thale cress | nucleus | 72.82 | 62.72 |
| CDY35992 | Canola | nucleus | 26.85 | 50.96 |
| CDY50737 | Canola | nucleus | 57.72 | 50.0 |
| CDY21728 | Canola | nucleus | 26.17 | 49.68 |
| CDY46444 | Canola | nucleus | 58.39 | 49.29 |
| CDY44993 | Canola | nucleus | 57.38 | 48.44 |
| CDX83880 | Canola | nucleus | 27.18 | 44.51 |
| CDX96475 | Canola | nucleus | 30.87 | 40.35 |
| Os08t0435700-00 | Rice | nucleus | 34.9 | 40.31 |
| CDX72988 | Canola | nucleus | 30.54 | 40.27 |
| CDX82074 | Canola | nucleus | 30.87 | 39.48 |
| CDY58312 | Canola | nucleus | 30.87 | 39.32 |
| CDX96742 | Canola | nucleus | 30.87 | 38.02 |
| CDY44415 | Canola | nucleus | 32.89 | 37.55 |
| CDY71713 | Canola | nucleus | 28.52 | 36.96 |
| CDX81853 | Canola | nucleus | 30.2 | 36.44 |
| CDY21727 | Canola | nucleus | 30.54 | 36.26 |
| CDY30264 | Canola | nucleus | 31.21 | 35.77 |
| CDY28302 | Canola | nucleus | 29.19 | 34.66 |
| CDX68977 | Canola | nucleus | 28.86 | 34.4 |
| CDX75353 | Canola | nucleus | 28.86 | 34.26 |
| CDY67808 | Canola | nucleus | 18.12 | 33.96 |
| CDY20004 | Canola | nucleus | 32.21 | 33.45 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 33.56 | 33.11 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 39.26 | 33.05 |
| CDY66025 | Canola | nucleus | 31.54 | 32.64 |
| CDY69058 | Canola | nucleus | 28.86 | 32.58 |
| CDY16884 | Canola | nucleus | 33.89 | 32.37 |
| CDX72405 | Canola | nucleus | 26.17 | 32.37 |
| CDX83109 | Canola | nucleus | 17.45 | 32.1 |
| CDX70776 | Canola | nucleus | 33.56 | 31.95 |
| CDX78761 | Canola | nucleus | 33.56 | 31.95 |
| CDX85443 | Canola | nucleus | 32.89 | 31.92 |
| CDY38460 | Canola | nucleus | 34.56 | 31.79 |
| CDY02687 | Canola | nucleus | 32.89 | 31.61 |
| CDY46114 | Canola | nucleus | 25.5 | 31.54 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 36.24 | 30.51 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 36.24 | 30.51 |
| CDY66170 | Canola | nucleus | 31.88 | 30.25 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 35.91 | 30.23 |
| Solyc05g007870.1.1 | Tomato | nucleus | 41.61 | 29.74 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 37.92 | 29.58 |
| KRH50566 | Soybean | nucleus | 42.95 | 29.36 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 44.63 | 29.1 |
| PGSC0003DMT400047415 | Potato | nucleus | 41.61 | 28.9 |
| KRH70748 | Soybean | nucleus | 43.29 | 27.62 |
| KRH74887 | Soybean | plastid | 42.95 | 27.53 |
| CDY12830 | Canola | nucleus | 22.48 | 26.48 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 33.89 | 26.44 |
| KRG89586 | Soybean | nucleus | 42.62 | 26.13 |
| CDX74436 | Canola | nucleus | 30.87 | 25.48 |
| CDY01420 | Canola | nucleus | 22.15 | 25.1 |
| CDY29542 | Canola | nucleus | 21.48 | 24.15 |
| CDY30608 | Canola | nucleus | 21.14 | 23.77 |
| CDX72621 | Canola | nucleus | 21.14 | 23.77 |
| CDY57355 | Canola | nucleus | 22.15 | 23.74 |
| CDY02098 | Canola | nucleus | 23.15 | 23.55 |
| CDY23023 | Canola | nucleus | 22.82 | 23.45 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 36.91 | 23.4 |
| CDY38933 | Canola | nucleus | 22.48 | 22.95 |
| CDY22442 | Canola | nucleus | 21.14 | 22.91 |
| CDX89554 | Canola | nucleus | 22.15 | 22.53 |
| CDY44045 | Canola | nucleus | 21.14 | 22.11 |
| CDX75635 | Canola | nucleus | 22.15 | 22.07 |
| CDX69287 | Canola | nucleus | 22.15 | 21.57 |
| CDX72208 | Canola | nucleus | 23.83 | 19.29 |
| CDX68566 | Canola | nucleus | 20.13 | 19.11 |
| CDY27271 | Canola | nucleus | 23.83 | 19.03 |
| CDY07907 | Canola | nucleus | 21.14 | 18.98 |
| CDX73963 | Canola | nucleus | 21.14 | 18.81 |
| CDY20494 | Canola | nucleus | 22.48 | 18.21 |
| CDY43567 | Canola | nucleus | 13.09 | 17.97 |
| CDX74825 | Canola | nucleus | 23.49 | 17.46 |
| OQU80507 | Sorghum | nucleus | 38.59 | 16.84 |
| CDY70901 | Canola | nucleus | 11.41 | 11.89 |
| CDY70773 | Canola | nucleus | 11.41 | 11.89 |
| Os08t0435725-00 | Rice | cytosol | 2.35 | 7.0 |
| CDX83108 | Canola | cytosol | 0.67 | 5.13 |
Protein Annotations
| EnsemblPlants:CDY07345 | EnsemblPlantsGene:GSBRNA2T00124300001 | Gene3D:1.10.10.60 | GO:A0A078EZ16 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY07345 | ProteinID:CDY07345.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE98B9 | UniProt:A0A078EZ16 | MapMan:15.5.2.1 | : |
Description
BnaA07g24240DBnaA07g24240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZ16]
Coordinates
chrLK031978:-:56693..57765
Molecular Weight (calculated)
34609.0 Da
IEP (calculated)
9.521
GRAVY (calculated)
-0.872
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEDHRRWMD QTASCGYFSL DISNYQHIGH SYASNREEEI KNPNQSNYGK RSKKDTRVCG SFRHSSKASV VRGHWRPDED AKLKKLVALD GPQNWNLIAE
101: KLQGRSAGKS CRLRWFNQLD PRINRRAFSE EEEERLMQAH NLYGNKWAMI ARFFPGRTDN SVKNHWHVIM ARKFRGQSSV YRRRKTVIPL KPLVNPNPQY
201: SCNDFDPSRS DTIHLVSNDK NHLMLPIPCF PGYAHGNESP LMLGMLENQM MVDDHSARTR EATTFDFLNQ TEKCEMLGEG MNEQKKPHFF DFLGLGTV
101: KLQGRSAGKS CRLRWFNQLD PRINRRAFSE EEEERLMQAH NLYGNKWAMI ARFFPGRTDN SVKNHWHVIM ARKFRGQSSV YRRRKTVIPL KPLVNPNPQY
201: SCNDFDPSRS DTIHLVSNDK NHLMLPIPCF PGYAHGNESP LMLGMLENQM MVDDHSARTR EATTFDFLNQ TEKCEMLGEG MNEQKKPHFF DFLGLGTV
001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.