Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23023 | Canola | nucleus | 58.97 | 7.93 |
| CDY57355 | Canola | nucleus | 53.85 | 7.55 |
| CDY30608 | Canola | nucleus | 51.28 | 7.55 |
| CDY02098 | Canola | nucleus | 56.41 | 7.51 |
| CDY12830 | Canola | nucleus | 41.03 | 6.32 |
| CDY01420 | Canola | nucleus | 41.03 | 6.08 |
| CDX72621 | Canola | nucleus | 35.9 | 5.28 |
| CDY29542 | Canola | nucleus | 33.33 | 4.91 |
| CDX75635 | Canola | nucleus | 35.9 | 4.68 |
| CDX69287 | Canola | nucleus | 35.9 | 4.58 |
| CDY44045 | Canola | nucleus | 33.33 | 4.56 |
| CDY22442 | Canola | nucleus | 30.77 | 4.36 |
| CDY38933 | Canola | nucleus | 30.77 | 4.11 |
| CDX89554 | Canola | nucleus | 30.77 | 4.1 |
| CDY43567 | Canola | nucleus | 20.51 | 3.69 |
| CDX68566 | Canola | nucleus | 28.21 | 3.5 |
| EES04668 | Sorghum | nucleus | 17.95 | 2.14 |
| TraesCS6B01G201700.1 | Wheat | nucleus | 15.38 | 2.05 |
| HORVU6Hr1G035470.1 | Barley | nucleus | 15.38 | 2.03 |
| TraesCS6D01G162900.1 | Wheat | nucleus | 15.38 | 2.02 |
| TraesCS6A01G173800.1 | Wheat | nucleus | 15.38 | 2.01 |
| Os02t0187700-00 | Rice | nucleus | 15.38 | 1.99 |
| Zm00001d015614_P001 | Maize | nucleus | 15.38 | 1.97 |
| Zm00001d036768_P001 | Maize | nucleus | 15.38 | 1.95 |
| Zm00001d046632_P001 | Maize | nucleus | 12.82 | 1.64 |
| Os06t0637500-02 | Rice | cytosol, mitochondrion, nucleus | 12.82 | 1.61 |
| EER90085 | Sorghum | nucleus | 12.82 | 1.6 |
| CDY70773 | Canola | nucleus | 10.26 | 1.4 |
| CDY70901 | Canola | nucleus | 10.26 | 1.4 |
| TraesCS7B01G444000.1 | Wheat | nucleus | 10.26 | 1.39 |
| TraesCS7A01G526600.1 | Wheat | nucleus | 10.26 | 1.37 |
| TraesCS7D01G515100.1 | Wheat | nucleus | 10.26 | 1.36 |
| TraesCS7A01G526500.1 | Wheat | nucleus | 10.26 | 1.35 |
| TraesCS7B01G443900.1 | Wheat | nucleus | 10.26 | 1.34 |
| TraesCS7D01G515000.1 | Wheat | nucleus | 10.26 | 1.34 |
| EES13945 | Sorghum | nucleus | 7.69 | 1.33 |
| TraesCS1D01G225200.1 | Wheat | nucleus | 10.26 | 1.32 |
| TraesCS1A01G223600.1 | Wheat | nucleus | 10.26 | 1.21 |
| CDY07907 | Canola | nucleus | 10.26 | 1.2 |
| CDX73963 | Canola | nucleus | 10.26 | 1.19 |
| HORVU7Hr1G116760.1 | Barley | mitochondrion | 10.26 | 1.12 |
| TraesCS7D01G514800.1 | Wheat | nucleus | 10.26 | 1.12 |
| TraesCS7B01G443800.1 | Wheat | nucleus | 7.69 | 1.02 |
| TraesCS1B01G236900.1 | Wheat | nucleus | 7.69 | 0.99 |
| Os05t0350900-01 | Rice | nucleus | 5.13 | 0.95 |
| Zm00001d037998_P001 | Maize | nucleus | 7.69 | 0.93 |
| CDY71713 | Canola | nucleus | 5.13 | 0.87 |
| EES18041 | Sorghum | nucleus | 7.69 | 0.84 |
| CDX72405 | Canola | nucleus | 5.13 | 0.83 |
| CDY46114 | Canola | nucleus | 5.13 | 0.83 |
| CDY20494 | Canola | nucleus | 7.69 | 0.82 |
| CDX68977 | Canola | nucleus | 5.13 | 0.8 |
| Os01t0977300-01 | Rice | nucleus | 5.13 | 0.8 |
| CDX75353 | Canola | nucleus | 5.13 | 0.8 |
| CDY28302 | Canola | nucleus | 5.13 | 0.8 |
| CDY30264 | Canola | nucleus | 5.13 | 0.77 |
| CDY44415 | Canola | nucleus | 5.13 | 0.77 |
| CDX74825 | Canola | nucleus | 7.69 | 0.75 |
| CDY20004 | Canola | nucleus | 5.13 | 0.7 |
| CDY66025 | Canola | nucleus | 5.13 | 0.69 |
| Zm00001d037999_P001 | Maize | nucleus | 5.13 | 0.69 |
| CDY07345 | Canola | nucleus | 5.13 | 0.67 |
| CDY67868 | Canola | nucleus | 5.13 | 0.67 |
| CDX85443 | Canola | nucleus | 5.13 | 0.65 |
| CDY02687 | Canola | nucleus | 5.13 | 0.65 |
| CDY16884 | Canola | nucleus | 5.13 | 0.64 |
| CDX70776 | Canola | nucleus | 5.13 | 0.64 |
| CDX78761 | Canola | nucleus | 5.13 | 0.64 |
| CDY66170 | Canola | nucleus | 5.13 | 0.64 |
| CDX95921 | Canola | nucleus | 5.13 | 0.62 |
| CDY40941 | Canola | nucleus | 5.13 | 0.62 |
| CDY38460 | Canola | nucleus | 5.13 | 0.62 |
| HORVU1Hr1G060030.1 | Barley | nucleus | 5.13 | 0.6 |
| CDY44993 | Canola | nucleus | 5.13 | 0.57 |
| CDY46444 | Canola | nucleus | 5.13 | 0.57 |
| CDX74436 | Canola | nucleus | 5.13 | 0.55 |
| CDX72208 | Canola | nucleus | 5.13 | 0.54 |
| Zm00001d037994_P001 | Maize | nucleus | 5.13 | 0.54 |
| CDY27271 | Canola | nucleus | 5.13 | 0.54 |
| TraesCS4A01G047900.1 | Wheat | nucleus | 2.56 | 0.53 |
| Os08t0450900-00 | Rice | nucleus | 2.56 | 0.5 |
| CDX72988 | Canola | nucleus | 2.56 | 0.44 |
| CDX96475 | Canola | nucleus | 2.56 | 0.44 |
| CDX96742 | Canola | nucleus | 2.56 | 0.41 |
| CDX81853 | Canola | nucleus | 2.56 | 0.4 |
| CDY21727 | Canola | nucleus | 2.56 | 0.4 |
| TraesCS4B01G299000.1 | Wheat | nucleus | 2.56 | 0.39 |
| TraesCS4D01G297900.1 | Wheat | nucleus | 2.56 | 0.39 |
| Zm00001d041935_P001 | Maize | nucleus | 2.56 | 0.38 |
| TraesCS4A01G006100.1 | Wheat | nucleus | 2.56 | 0.37 |
| HORVU4Hr1G077230.1 | Barley | nucleus | 2.56 | 0.36 |
| OQU75658 | Sorghum | nucleus | 2.56 | 0.35 |
| CDY50737 | Canola | nucleus | 2.56 | 0.29 |
| CDX82074 | Canola | nucleus | 0.0 | 0.0 |
| CDX83109 | Canola | nucleus | 0.0 | 0.0 |
| CDX83880 | Canola | nucleus | 0.0 | 0.0 |
| CDY21728 | Canola | nucleus | 0.0 | 0.0 |
| CDY35992 | Canola | nucleus | 0.0 | 0.0 |
| CDY58312 | Canola | nucleus | 0.0 | 0.0 |
| CDY67808 | Canola | nucleus | 0.0 | 0.0 |
| CDY69058 | Canola | nucleus | 0.0 | 0.0 |
| HORVU7Hr1G116750.3 | Barley | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX83108 | EnsemblPlantsGene:GSBRNA2T00138618001 | ProteinID:CDX83108 | ProteinID:CDX83108.1 | SEG:seg | UniParc:UPI0004EF1F39 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g21080D
Coordinates
chrLK031831:-:1705589..1705869
Molecular Weight (calculated)
4011.7 Da
IEP (calculated)
4.265
GRAVY (calculated)
-0.256
Length
39 amino acids
Sequence
(BLAST)
(BLAST)
1: MAEMQKNSGG GGGEFIVSGF YDAGNGGFRD SGMIIPKVE
001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
Arabidopsis Description
MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.