Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G297900.1 | Wheat | nucleus | 83.52 | 88.03 |
| TraesCS4B01G299000.1 | Wheat | nucleus | 83.52 | 88.03 |
| HORVU4Hr1G077230.1 | Barley | nucleus | 79.12 | 77.42 |
| Zm00001d041935_P001 | Maize | nucleus | 47.25 | 48.86 |
| Os01t0977300-01 | Rice | nucleus | 43.59 | 47.6 |
| OQU75658 | Sorghum | nucleus | 47.99 | 45.96 |
| CDX83109 | Canola | nucleus | 26.74 | 45.06 |
| TraesCS4A01G047900.1 | Wheat | nucleus | 24.54 | 35.26 |
| TraesCS1A01G223600.1 | Wheat | nucleus | 38.83 | 32.02 |
| TraesCS6A01G173800.1 | Wheat | nucleus | 34.43 | 31.54 |
| TraesCS7A01G526600.1 | Wheat | nucleus | 32.6 | 30.58 |
| TraesCS7A01G526500.1 | Wheat | nucleus | 32.23 | 29.63 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 32.97 | 26.79 |
| CDY43567 | Canola | nucleus | 18.68 | 23.5 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 21.61 | 21.38 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 24.91 | 20.92 |
| TraesCS4A01G262500.3 | Wheat | nucleus | 20.51 | 20.29 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 21.61 | 16.67 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 26.37 | 15.58 |
| CDX83108 | Canola | cytosol | 0.37 | 2.56 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G006100.1 | EnsemblPlantsGene:TraesCS4A01G006100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF717 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:3798951..3799772
Molecular Weight (calculated)
29315.2 Da
IEP (calculated)
10.366
GRAVY (calculated)
-0.285
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPAVACVGY DRTDAMEVPS PIKTGSWSPE EDALLVALVR QHGARRWSVI SASVPGRTGK SCRLRWCNQL SPAVQHRPFT VQEDALIIAA QARYGNKWAD
101: IARLLPGRTD NSVKNHWNSN LRRCQRRAKA MAAATAARVA ASSSSSGSAV RAKMQQEEQV MVMNRSPPAV VHGAVTAVID DPMPMLSLTL SLGLPQMAAD
201: KASEEAKAKA KEKTPPPVGV GGNDVRLMAA IRQVVREEVE RQAGQLLYSV VMATTAARVD GASSSDHPTN GHH
101: IARLLPGRTD NSVKNHWNSN LRRCQRRAKA MAAATAARVA ASSSSSGSAV RAKMQQEEQV MVMNRSPPAV VHGAVTAVID DPMPMLSLTL SLGLPQMAAD
201: KASEEAKAKA KEKTPPPVGV GGNDVRLMAA IRQVVREEVE RQAGQLLYSV VMATTAARVD GASSSDHPTN GHH
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
Arabidopsis Description
AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.