Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0450900-00 | Rice | nucleus | 61.58 | 58.5 |
| EES13945 | Sorghum | nucleus | 61.05 | 51.56 |
| CDX83109 | Canola | nucleus | 28.95 | 33.95 |
| TraesCS4A01G006100.1 | Wheat | nucleus | 35.26 | 24.54 |
| TraesCS6A01G173800.1 | Wheat | nucleus | 38.42 | 24.5 |
| TraesCS7A01G526600.1 | Wheat | nucleus | 35.26 | 23.02 |
| TraesCS7A01G526500.1 | Wheat | nucleus | 35.79 | 22.9 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 39.47 | 22.32 |
| TraesCS1A01G223600.1 | Wheat | nucleus | 37.89 | 21.75 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 27.89 | 19.2 |
| TraesCS4A01G262500.3 | Wheat | nucleus | 24.74 | 17.03 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 28.95 | 16.92 |
| CDY43567 | Canola | nucleus | 18.95 | 16.59 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 27.37 | 14.69 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 33.16 | 13.64 |
| CDX83108 | Canola | cytosol | 0.53 | 2.56 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G047900.1 | EnsemblPlantsGene:TraesCS4A01G047900 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF504 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:38805132..38805704
Molecular Weight (calculated)
20500.8 Da
IEP (calculated)
4.596
GRAVY (calculated)
-0.525
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGGGGGD VGRADGCKKT PWTPEEDEAL RRGVREHGAK SWDAIALALP GRASKSCRLR WCQHLSPELD SRPFTPEEDE EIIRRQREFG NKWATIARYL
101: TGRSDNSVKN RWNSTLRKQL LGAHATEDDA AAAEDDQAVR VCLQLFPMTA GVLEEEAEAA AAAEGDVTTD LTLGLPGLGE ASAVDLSLSL
101: TGRSDNSVKN RWNSTLRKQL LGAHATEDDA AAAEDDQAVR VCLQLFPMTA GVLEEEAEAA AAAEGDVTTD LTLGLPGLGE ASAVDLSLSL
001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
Arabidopsis Description
MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.