Factsheet for TraesCS7A01G526500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G443800.1	Wheat	nucleus	90.91	91.53
TraesCS7D01G515100.1	Wheat	nucleus	86.87	87.76
TraesCS7A01G526600.1	Wheat	nucleus	85.52	87.29
HORVU7Hr1G116750.3	Barley	nucleus	84.51	85.37
Zm00001d046632_P001	Maize	nucleus	70.71	69.08
EER90085	Sorghum	nucleus	69.36	65.81
Zm00001d036768_P001	Maize	nucleus	67.34	64.94
TraesCS6A01G173800.1	Wheat	nucleus	64.65	64.43
CDX83109	Canola	nucleus	25.93	47.53
TraesCS5A01G159600.1	Wheat	nucleus	45.45	40.18
CDY43567	Canola	nucleus	29.29	40.09
TraesCS4A01G047900.1	Wheat	nucleus	22.9	35.79
TraesCS4A01G006100.1	Wheat	nucleus	29.63	32.23
TraesCS1A01G223600.1	Wheat	nucleus	34.34	30.82
TraesCS4A01G211100.1	Wheat	nucleus	23.57	25.36
TraesCS4A01G262500.3	Wheat	nucleus	22.9	24.64
TraesCS3A01G187800.1	Wheat	nucleus	25.93	23.69
TraesCS3A01G365200.1	Wheat	nucleus	29.63	19.05
TraesCS3A01G439500.1	Wheat	nucleus	21.89	18.36
CDX83108	Canola	cytosol	1.35	10.26

Protein Annotations

EnsemblPlants:TraesCS7A01G526500.1	EnsemblPlantsGene:TraesCS7A01G526500	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF896	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:708319097..708319990

Molecular Weight (calculated)

31877.1 Da

IEP (calculated)

8.100

GRAVY (calculated)

-0.629

Length

297 amino acids

Sequence
(BLAST)

001: MEGCDRIRGP WSPEEDGALR RLVELHGARN WTAIGRGVPG RSGKSCRLRW CNQLSPGVER RPFTAEEDTV IARAHVRIGN RWAAIARLLR GRTDNAVKNH
101: WNCSLKRRLG DLGADGVTEG DLDERPCKRA SVTPESTSGS GSGSGSGSDR SDLSHGGAFG LGQVYRPVAR AGGFEPADCA MSQRHEEEQE DPFTSLSLSL
201: PGTDAHGFHH DSSHSHFHQP SPSPSPPPAT ASTTAPPASS YPFSPAFAAA MQEMIRDEVR RYISGVSCGS NLPSMPQLVD GVMRAAAERA GGVSRMR

Best Arabidopsis Sequence Match ( AT2G23290.1 )
(BLAST)

001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE

Arabidopsis Description

AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.