Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90085 | Sorghum | nucleus | 87.5 | 84.98 |
| Zm00001d036768_P001 | Maize | nucleus | 76.64 | 75.65 |
| TraesCS7B01G444000.1 | Wheat | nucleus | 71.05 | 75.0 |
| TraesCS7A01G526600.1 | Wheat | nucleus | 70.72 | 73.88 |
| TraesCS7D01G515100.1 | Wheat | nucleus | 70.72 | 73.13 |
| TraesCS7B01G443800.1 | Wheat | nucleus | 69.08 | 71.19 |
| TraesCS7A01G526500.1 | Wheat | nucleus | 69.08 | 70.71 |
| TraesCS7B01G443900.1 | Wheat | nucleus | 68.75 | 70.13 |
| TraesCS7D01G515000.1 | Wheat | nucleus | 68.75 | 70.13 |
| HORVU7Hr1G116750.3 | Barley | nucleus | 63.82 | 65.99 |
| Zm00001d015614_P001 | Maize | nucleus | 65.79 | 65.79 |
| HORVU7Hr1G116760.1 | Barley | mitochondrion | 67.76 | 57.87 |
| TraesCS7D01G514800.1 | Wheat | nucleus | 67.76 | 57.54 |
| CDX83109 | Canola | nucleus | 25.66 | 48.15 |
| Zm00001d005300_P001 | Maize | nucleus | 44.08 | 47.02 |
| Zm00001d019712_P001 | Maize | nucleus | 47.7 | 42.03 |
| CDY43567 | Canola | nucleus | 29.93 | 41.94 |
| Zm00001d041935_P001 | Maize | nucleus | 32.57 | 37.5 |
| Zm00001d004681_P001 | Maize | nucleus | 20.07 | 31.94 |
| Zm00001d041818_P001 | Maize | nucleus | 23.03 | 31.11 |
| Zm00001d037999_P001 | Maize | nucleus | 26.32 | 27.49 |
| Zm00001d037994_P001 | Maize | nucleus | 32.89 | 27.1 |
| Zm00001d013399_P001 | Maize | nucleus | 21.05 | 26.67 |
| Zm00001d040426_P001 | Maize | nucleus | 23.68 | 25.9 |
| Zm00001d033815_P001 | Maize | nucleus | 21.05 | 25.81 |
| Zm00001d037998_P001 | Maize | nucleus | 26.32 | 24.92 |
| Zm00001d049079_P001 | Maize | nucleus | 22.7 | 24.91 |
| Zm00001d040423_P001 | Maize | nucleus | 24.01 | 24.5 |
| Zm00001d008251_P002 | Maize | nucleus | 24.01 | 24.41 |
| Zm00001d040428_P001 | Maize | nucleus | 22.04 | 23.67 |
| Zm00001d012379_P001 | Maize | nucleus | 30.59 | 23.19 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 22.37 | 17.8 |
| CDX83108 | Canola | cytosol | 1.64 | 12.82 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100304070 | MapMan:15.5.2.1 | ProteinID:AQL04771.1 | UniProt:B6TWV8 | EMBL:EU969473 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EMBL:KJ727531 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF896 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000182E4FF | EnsemblPlantsGene:Zm00001d046632 | EnsemblPlants:Zm00001d046632_P001 |
| EnsemblPlants:Zm00001d046632_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 112MYB transcription factor TaMYB1%3B Putative MYB DNA-binding domain superfamily protein
Coordinates
chr9:+:99815018..99815932
Molecular Weight (calculated)
32631.2 Da
IEP (calculated)
7.475
GRAVY (calculated)
-0.620
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEADCDRI RGPWSPEEDD ALRRLVERHG ARNWTAIGRE IPGRSGKSCR LRWCNQLSPQ VERRPFTAEE DAAIVRAHAR LGNRWAAIAR LLPGRTDNAV
101: KNHWNCSLKR KLAAASAPAG SSDVEARPTK RVSLSPDSPS GSGSGSGSGS GSGSGSDRSD LSHGAGQVYR PVARSGGFEP ADCAMSRPLE EEEEEKEDPL
201: TSLSLSLPGT DQRFHHDRAH SQFQELPASP PSPSPPPPPV LSAYPFSPVF MEAMQELIRT EVQRYMASVG VRAGCGAAGG ADLCMPQLVD GVMRAAAERV
301: GRMQ
101: KNHWNCSLKR KLAAASAPAG SSDVEARPTK RVSLSPDSPS GSGSGSGSGS GSGSGSDRSD LSHGAGQVYR PVARSGGFEP ADCAMSRPLE EEEEEKEDPL
201: TSLSLSLPGT DQRFHHDRAH SQFQELPASP PSPSPPPPPV LSAYPFSPVF MEAMQELIRT EVQRYMASVG VRAGCGAAGG ADLCMPQLVD GVMRAAAERV
301: GRMQ
001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE
Arabidopsis Description
MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.