Factsheet for HORVU7Hr1G116760.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G526600.1	Wheat	nucleus	73.6	90.03
TraesCS7B01G444000.1	Wheat	nucleus	72.47	89.58
TraesCS7D01G515000.1	Wheat	nucleus	69.1	82.55
TraesCS7B01G443900.1	Wheat	nucleus	68.54	81.88
HORVU7Hr1G116750.3	Barley	nucleus	65.17	78.91
Zm00001d046632_P001	Maize	nucleus	57.87	67.76
EER90085	Sorghum	nucleus	57.58	65.5
HORVU6Hr1G035470.1	Barley	nucleus	53.65	64.53
Zm00001d036768_P001	Maize	nucleus	55.62	64.29
CDX83109	Canola	nucleus	21.91	48.15
CDY43567	Canola	nucleus	23.31	38.25
HORVU5Hr1G049880.1	Barley	plastid	39.89	33.49
HORVU4Hr1G077230.1	Barley	nucleus	25.28	32.26
HORVU1Hr1G060030.1	Barley	nucleus	28.09	29.94
HORVU4Hr1G008640.1	Barley	nucleus	18.26	26.75
HORVU4Hr1G017040.2	Barley	nucleus	19.94	25.54
HORVU3Hr1G038700.2	Barley	nucleus	22.19	23.94
HORVU3Hr1G085570.1	Barley	plastid	26.97	20.82
HORVU3Hr1G096010.6	Barley	nucleus	18.26	17.02
CDX83108	Canola	cytosol	1.12	10.26

Protein Annotations

EnsemblPlants:HORVU7Hr1G116760.1	EnsemblPlantsGene:HORVU7Hr1G116760	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF926	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B48078D	UniProt:A0A287XXX2	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:644104702..644106177

Molecular Weight (calculated)

38990.0 Da

IEP (calculated)

8.986

GRAVY (calculated)

-0.568

Length

356 amino acids

Sequence
(BLAST)

001: RRFRFRCVHA CSWMGPRAAS CCCRPHHRLQ VVQIPPPISS PPTTTTTARL AAVHFNRSSQ PASQADRSIV MEGCDRIRGP WSPEEDGALR RLVERHGARN
101: WTAIGRGVPG RSGKSCRLRW CNQLSPGVER RPFTAEEDAA IARAHARLGN RWAAIARLLR GRTDNAVKNH WNCSLKRRLA DVGVAEEEER PCKRASVSPE
201: STSGSGSDRS DLSNGGVLNF GLGQVYRPLA RTGRFEPADC AMSQRHEVEL EEEAEDPLTS LSLSLPGTDA HGFRHDSSHS HFHQPSPSPS PPPAPAPTSY
301: PFSPEFAAVM QEMVLDEVRR YISGVGCSAN LPSMPQVVDG VMRAAAERAG GLARMQ

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.