Factsheet for HORVU1Hr1G060030.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G225200.1	Wheat	nucleus	75.75	83.22
TraesCS1B01G236900.1	Wheat	nucleus	73.35	80.86
TraesCS1A01G223600.1	Wheat	nucleus	75.75	76.44
EES18041	Sorghum	nucleus	44.31	41.46
CDX83109	Canola	nucleus	19.76	40.74
Os05t0350900-01	Rice	nucleus	24.25	38.39
HORVU4Hr1G077230.1	Barley	nucleus	32.04	38.35
Zm00001d037994_P001	Maize	nucleus	39.82	36.04
HORVU7Hr1G116750.3	Barley	nucleus	29.64	33.67
HORVU6Hr1G035470.1	Barley	nucleus	29.34	33.11
CDY43567	Canola	nucleus	18.86	29.03
Zm00001d037999_P001	Maize	nucleus	24.85	28.52
HORVU7Hr1G116760.1	Barley	mitochondrion	29.94	28.09
Zm00001d037998_P001	Maize	nucleus	24.25	25.23
HORVU4Hr1G008640.1	Barley	nucleus	17.66	24.28
HORVU5Hr1G049880.1	Barley	plastid	29.64	23.35
HORVU4Hr1G017040.2	Barley	nucleus	17.37	20.86
HORVU3Hr1G038700.2	Barley	nucleus	19.16	19.39
HORVU3Hr1G085570.1	Barley	plastid	25.15	18.22
HORVU3Hr1G096010.6	Barley	nucleus	17.37	15.18
CDX83108	Canola	cytosol	0.6	5.13

Protein Annotations

EnsemblPlants:HORVU1Hr1G060030.1	EnsemblPlantsGene:HORVU1Hr1G060030	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF907	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B470192	UniProt:A0A287FUD1	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:436167793..436169855

Molecular Weight (calculated)

35500.5 Da

IEP (calculated)

9.301

GRAVY (calculated)

-0.734

Length

334 amino acids

Sequence
(BLAST)

001: PRPTREEGRK RPRMPDGGGG GGGGDGSDGA GRIKGSWSPE EDELLRDAVA RHGARNWTVI SAEIPGRTGK SCRLRWCNQL SPGVHRRAFT PDEDRVIFEE
101: HSKHGNKWAT IARKLQGRTD NSVKNHWNST LRKRRRAAAA AAAAAAGNGP VFAPVAAMSF QSVDLTKGGE DDYEDSDGSV EPPAKRQHPD VGGAVPPAVK
201: NLDDQAPPPP DPPTSLSLSL PGTGASAVTP PAPPAPATAP TTTMDAWIRA TLESPWVKET MQKMIAEEVQ RNPMFKEAME RVAADEVRRQ MGSTVCSIVA
301: SLSRAGAGAA TLPTARIDRA ETHPAGGRDQ RTDG

Best Arabidopsis Sequence Match ( AT4G37260.1 )
(BLAST)

001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME

Arabidopsis Description

MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.