Factsheet for Os05t0350900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G225200.1	Wheat	nucleus	40.76	28.29
EES18041	Sorghum	nucleus	47.39	28.01
TraesCS1B01G236900.1	Wheat	nucleus	38.86	27.06
TraesCS1A01G223600.1	Wheat	nucleus	41.23	26.28
Os01t0977300-01	Rice	nucleus	29.38	24.8
HORVU1Hr1G060030.1	Barley	nucleus	38.39	24.25
Zm00001d037994_P001	Maize	nucleus	41.71	23.85
Os08t0450900-00	Rice	nucleus	17.54	18.5
Os02t0187700-00	Rice	nucleus	22.75	15.95
Os06t0637500-02	Rice	cytosol, mitochondrion, nucleus	22.75	15.43
Os09t0106700-01	Rice	nucleus	23.22	15.36
CDX83109	Canola	nucleus	10.9	14.2
Zm00001d037999_P001	Maize	nucleus	17.06	12.37
CDY43567	Canola	nucleus	11.85	11.52
Zm00001d037998_P001	Maize	nucleus	17.06	11.21
Os01t0274800-01	Rice	nucleus	12.32	9.81
Os08t0435700-00	Rice	nucleus	11.85	9.69
Os03t0720800-01	Rice	nucleus	10.9	9.39
Os01t0850400-01	Rice	nucleus	16.11	8.23
Os11t0207600-00	Rice	nucleus, plastid	9.95	7.87
CDX83108	Canola	cytosol	0.95	5.13
Os08t0435725-00	Rice	cytosol	0.47	1.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	UniProt:A0A0P0WL63	ProteinID:BAS93536.1	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os05g0350900	EnsemblPlants:Os05t0350900-01	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF925	InterPro:SANT/Myb	SUPFAM:SSF46689	UniParc:UPI000393B391	SEG:seg

Description

Hypothetical conserved gene. (Os05t0350900-01)

Coordinates

chr5:-:16582173..16583011

Molecular Weight (calculated)

21684.3 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.357

Length

211 amino acids

Sequence
(BLAST)

001: KWATIARLLD GRTDNSVKNH WNSSLRRNRR AAAAAAAAAA SVSYQSMDLT EEADNDDEGT SDDSVAIPAQ SSPAAVVAGV PVLPPPPPPA KRLCVAPPTG
101: VEHRAPPPDP PTSLSLSPPG AAAAAISAST VVGGSSAARA EEEAVAREKA RMEQDPWLMA MMRQMITEEV QRQVSVVYSL VASSAAMAAQ TGNAGGVGRK
201: GPDGRPSNGQ D

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.