Factsheet for Os02t0187700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G035470.1	Barley	nucleus	80.73	82.09
TraesCS6A01G173800.1	Wheat	nucleus	80.73	81.54
TraesCS6D01G162900.1	Wheat	nucleus	80.4	81.48
TraesCS6B01G201700.1	Wheat	nucleus	78.74	80.89
Zm00001d015614_P001	Maize	nucleus	80.73	79.93
EES04668	Sorghum	nucleus	81.73	75.23
Os06t0637500-02	Rice	cytosol, mitochondrion, nucleus	69.1	66.88
CDX83109	Canola	nucleus	26.58	49.38
Os09t0106700-01	Rice	nucleus	50.83	47.96
CDY43567	Canola	nucleus	30.56	42.4
Os01t0977300-01	Rice	nucleus	32.89	39.6
Os08t0450900-00	Rice	nucleus	22.92	34.5
Os03t0720800-01	Rice	nucleus	23.26	28.57
Os01t0274800-01	Rice	nucleus	23.59	26.79
Os11t0207600-00	Rice	nucleus, plastid	22.59	25.47
Os08t0435700-00	Rice	nucleus	20.93	24.42
Os05t0350900-01	Rice	nucleus	15.95	22.75
Os01t0850400-01	Rice	nucleus	30.56	22.28
CDX83108	Canola	cytosol	1.99	15.38
Os08t0435725-00	Rice	cytosol	1.99	6.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4328551	ProteinID:BAD15427.1	ProteinID:BAD15518.1	ProteinID:BAF08045.1
ProteinID:BAS77368.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
EnsemblPlantsGene:Os02g0187700	EnsemblPlants:Os02t0187700-00	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF926
UniProt:Q6ZHS5	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000358A48	RefSeq:XP_015623498.1
SEG:seg	:	:	:	:	:

Description

Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1). (Os02t0187700-00)

Coordinates

chr2:+:4867738..4868831

Molecular Weight (calculated)

32324.0 Da

IEP (calculated)

8.625

GRAVY (calculated)

-0.630

Length

301 amino acids

Sequence
(BLAST)

001: MGMEAECDRI KGPWSPEEDE ALRRLVERHG ARNWTAIGRG IPGRSGKSCR LRWCNQLSPQ VERRPFTAEE DAAILRAHAR LGNRWAAIAR LLPGRTDNAV
101: KNHWNSSLKR KLATATDGGE IDRPCKRVSP GPGSPTGSER SELSHGGCGS GSGGGQVFRP VPRPGGFDAI SAADVVRPPR RRDDNDDDGD DDPLTSLSLS
201: LSLPGFHHDS ARSHFQELPS PSRSPSPPPS PPAASPSAYP FNADLVSAMQ EMIRTEVRNY MAGVGLRAGC GPGAVAESFM PQLVDGVMRA AAERVGVVTR
301: Q

Best Arabidopsis Sequence Match ( AT5G67300.1 )
(BLAST)

001: MADRIKGPWS PEEDEQLRRL VVKYGPRNWT VISKSIPGRS GKSCRLRWCN QLSPQVEHRP FSAEEDETIA RAHAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCGGY DHRGYDGSED HRPVKRSVSA GSPPVVTGLY MSPGSPTGSD VSDSSTIPIL PSVELFKPVP RPGAVVLPLP IETSSSSDDP PTSLSLSLPG
201: ADVSEESNRS HESTNINNTT SSRHNHNNTV SFMPFSGGFR GAIEEMGKSF PGNGGEFMAV VQEMIKAEVR SYMTEMQRNN GGGFVGGFID NGMIPMSQIG
301: VGRIE

Arabidopsis Description

MYB44MYBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ74]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.