Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68566 | Canola | nucleus | 90.12 | 46.5 |
| CDY30608 | Canola | nucleus | 75.31 | 46.04 |
| CDY57355 | Canola | nucleus | 77.78 | 45.32 |
| CDY23023 | Canola | nucleus | 78.4 | 43.79 |
| CDY02098 | Canola | nucleus | 79.01 | 43.69 |
| CDY12830 | Canola | nucleus | 59.26 | 37.94 |
| CDY01420 | Canola | nucleus | 58.64 | 36.12 |
| CDY29542 | Canola | nucleus | 55.56 | 33.96 |
| CDX72621 | Canola | nucleus | 54.94 | 33.58 |
| CDY22442 | Canola | nucleus | 56.79 | 33.45 |
| CDY21728 | Canola | nucleus | 31.48 | 32.48 |
| CDY44045 | Canola | nucleus | 56.79 | 32.28 |
| CDY35992 | Canola | nucleus | 30.25 | 31.21 |
| CDY38933 | Canola | nucleus | 54.94 | 30.48 |
| CDX75635 | Canola | nucleus | 56.17 | 30.43 |
| CDX89554 | Canola | nucleus | 54.94 | 30.38 |
| CDX69287 | Canola | nucleus | 56.17 | 29.74 |
| TraesCS4A01G047900.1 | Wheat | nucleus | 33.95 | 28.95 |
| CDY43567 | Canola | nucleus | 38.27 | 28.57 |
| Os08t0450900-00 | Rice | nucleus | 35.19 | 28.5 |
| TraesCS4D01G297900.1 | Wheat | nucleus | 44.44 | 27.8 |
| Os01t0977300-01 | Rice | nucleus | 42.59 | 27.6 |
| TraesCS4B01G299000.1 | Wheat | nucleus | 43.83 | 27.41 |
| TraesCS6B01G201700.1 | Wheat | nucleus | 49.38 | 27.3 |
| HORVU6Hr1G035470.1 | Barley | nucleus | 49.38 | 27.03 |
| TraesCS6D01G162900.1 | Wheat | nucleus | 49.38 | 26.94 |
| CDX83880 | Canola | nucleus | 30.25 | 26.92 |
| TraesCS6A01G173800.1 | Wheat | nucleus | 49.38 | 26.85 |
| TraesCS4A01G006100.1 | Wheat | nucleus | 45.06 | 26.74 |
| TraesCS7B01G444000.1 | Wheat | nucleus | 47.53 | 26.74 |
| Os02t0187700-00 | Rice | nucleus | 49.38 | 26.58 |
| HORVU7Hr1G116750.3 | Barley | nucleus | 48.15 | 26.53 |
| TraesCS7D01G515100.1 | Wheat | nucleus | 48.15 | 26.53 |
| Zm00001d041935_P001 | Maize | nucleus | 43.21 | 26.52 |
| TraesCS7B01G443800.1 | Wheat | nucleus | 48.15 | 26.44 |
| TraesCS7B01G443900.1 | Wheat | nucleus | 48.15 | 26.17 |
| TraesCS7D01G515000.1 | Wheat | nucleus | 48.15 | 26.17 |
| TraesCS7A01G526600.1 | Wheat | nucleus | 46.91 | 26.12 |
| Zm00001d015614_P001 | Maize | nucleus | 48.77 | 25.99 |
| TraesCS7A01G526500.1 | Wheat | nucleus | 47.53 | 25.93 |
| Zm00001d046632_P001 | Maize | nucleus | 48.15 | 25.66 |
| Zm00001d036768_P001 | Maize | nucleus | 48.77 | 25.65 |
| HORVU4Hr1G077230.1 | Barley | nucleus | 43.83 | 25.45 |
| Os06t0637500-02 | Rice | cytosol, mitochondrion, nucleus | 47.53 | 24.76 |
| EER90085 | Sorghum | nucleus | 47.53 | 24.6 |
| EES04668 | Sorghum | nucleus | 49.38 | 24.46 |
| EES13945 | Sorghum | nucleus | 33.95 | 24.44 |
| CDX72988 | Canola | nucleus | 33.95 | 24.34 |
| OQU75658 | Sorghum | nucleus | 42.59 | 24.21 |
| CDX96475 | Canola | nucleus | 33.95 | 24.12 |
| CDX82074 | Canola | nucleus | 33.33 | 23.18 |
| CDY58312 | Canola | nucleus | 33.33 | 23.08 |
| CDY71713 | Canola | nucleus | 32.72 | 23.04 |
| Zm00001d037999_P001 | Maize | nucleus | 40.12 | 22.34 |
| HORVU7Hr1G116760.1 | Barley | mitochondrion | 48.15 | 21.91 |
| CDY44415 | Canola | nucleus | 35.19 | 21.84 |
| TraesCS1B01G236900.1 | Wheat | nucleus | 40.74 | 21.78 |
| TraesCS1D01G225200.1 | Wheat | nucleus | 40.74 | 21.71 |
| TraesCS7D01G514800.1 | Wheat | nucleus | 47.53 | 21.51 |
| CDX72405 | Canola | nucleus | 31.48 | 21.16 |
| CDX96742 | Canola | nucleus | 31.48 | 21.07 |
| CDX73963 | Canola | nucleus | 43.21 | 20.9 |
| CDX68977 | Canola | nucleus | 32.1 | 20.8 |
| CDY07907 | Canola | nucleus | 42.59 | 20.78 |
| CDY46114 | Canola | nucleus | 30.86 | 20.75 |
| CDX75353 | Canola | nucleus | 32.1 | 20.72 |
| CDY28302 | Canola | nucleus | 32.1 | 20.72 |
| CDX81853 | Canola | nucleus | 31.48 | 20.65 |
| EES18041 | Sorghum | nucleus | 45.06 | 20.45 |
| TraesCS1A01G223600.1 | Wheat | nucleus | 40.74 | 19.94 |
| CDY20004 | Canola | nucleus | 35.19 | 19.86 |
| CDY66025 | Canola | nucleus | 35.19 | 19.79 |
| Zm00001d037994_P001 | Maize | nucleus | 45.06 | 19.78 |
| HORVU1Hr1G060030.1 | Barley | nucleus | 40.74 | 19.76 |
| CDY21727 | Canola | nucleus | 30.25 | 19.52 |
| CDY67808 | Canola | nucleus | 19.14 | 19.5 |
| Zm00001d037998_P001 | Maize | nucleus | 37.65 | 19.0 |
| CDY30264 | Canola | nucleus | 30.25 | 18.85 |
| CDY69058 | Canola | nucleus | 30.25 | 18.56 |
| CDY27271 | Canola | nucleus | 41.98 | 18.23 |
| CDX72208 | Canola | nucleus | 41.36 | 18.21 |
| CDY66170 | Canola | nucleus | 34.57 | 17.83 |
| CDY20494 | Canola | nucleus | 40.12 | 17.66 |
| CDY07345 | Canola | nucleus | 32.1 | 17.45 |
| CDY67868 | Canola | nucleus | 32.1 | 17.45 |
| CDX85443 | Canola | nucleus | 31.48 | 16.61 |
| CDX95921 | Canola | nucleus | 32.72 | 16.56 |
| CDY40941 | Canola | nucleus | 32.72 | 16.56 |
| CDY02687 | Canola | nucleus | 31.48 | 16.45 |
| CDY16884 | Canola | nucleus | 31.48 | 16.35 |
| CDX74825 | Canola | nucleus | 40.12 | 16.21 |
| CDY38460 | Canola | nucleus | 31.48 | 15.74 |
| CDX70776 | Canola | nucleus | 30.25 | 15.65 |
| CDX78761 | Canola | nucleus | 30.25 | 15.65 |
| CDY50737 | Canola | nucleus | 32.72 | 15.41 |
| CDY44993 | Canola | nucleus | 33.33 | 15.3 |
| CDY46444 | Canola | nucleus | 33.33 | 15.3 |
| CDX74436 | Canola | nucleus | 30.25 | 13.57 |
| CDY70773 | Canola | nucleus | 20.99 | 11.89 |
| CDY70901 | Canola | nucleus | 20.99 | 11.89 |
| Os05t0350900-01 | Rice | nucleus | 14.2 | 10.9 |
| CDX83108 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX83109 | EnsemblPlantsGene:GSBRNA2T00138619001 | Gene3D:1.10.10.60 | GO:A0A078D4A1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF940 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX83109 | ProteinID:CDX83109.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEBF6D | MapMan:15.5.2.1 | : |
Description
BnaA01g21090D
Coordinates
chrLK031831:-:1705920..1706634
Molecular Weight (calculated)
18282.6 Da
IEP (calculated)
10.319
GRAVY (calculated)
-0.938
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRVKGPWS QEEDEQLRRM VEHYGPRNWS EVSKSVPGRS GKSCRLRWCN QLSPDVEHRP FSSDEDKTIV SARATFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCLGG GGDGNLIVMR TDQDRRKKRR SVSSESATPV DTGLYMSPEN TTRCCFPGLG VK
101: STLKRKCLGG GGDGNLIVMR TDQDRRKKRR SVSSESATPV DTGLYMSPEN TTRCCFPGLG VK
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
Arabidopsis Description
AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.