Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G444000.1 | Wheat | nucleus | 93.13 | 94.1 |
TraesCS7A01G526500.1 | Wheat | nucleus | 87.29 | 85.52 |
TraesCS7D01G515000.1 | Wheat | nucleus | 86.94 | 84.9 |
HORVU7Hr1G116760.1 | Barley | mitochondrion | 90.03 | 73.6 |
Zm00001d046632_P001 | Maize | nucleus | 73.88 | 70.72 |
EER90085 | Sorghum | nucleus | 72.85 | 67.73 |
Zm00001d036768_P001 | Maize | nucleus | 69.42 | 65.58 |
TraesCS6A01G173800.1 | Wheat | nucleus | 66.67 | 65.1 |
CDX83109 | Canola | nucleus | 26.12 | 46.91 |
TraesCS5A01G159600.1 | Wheat | nucleus | 47.77 | 41.37 |
CDY43567 | Canola | nucleus | 29.9 | 40.09 |
TraesCS4A01G047900.1 | Wheat | nucleus | 23.02 | 35.26 |
TraesCS4A01G006100.1 | Wheat | nucleus | 30.58 | 32.6 |
TraesCS1A01G223600.1 | Wheat | nucleus | 35.05 | 30.82 |
TraesCS4A01G211100.1 | Wheat | nucleus | 24.05 | 25.36 |
TraesCS4A01G262500.3 | Wheat | nucleus | 23.37 | 24.64 |
TraesCS3A01G187800.1 | Wheat | nucleus | 25.77 | 23.08 |
TraesCS3A01G365200.1 | Wheat | nucleus | 30.93 | 19.48 |
TraesCS3A01G439500.1 | Wheat | nucleus | 21.99 | 18.08 |
CDX83108 | Canola | cytosol | 1.37 | 10.26 |
Protein Annotations
EnsemblPlants:TraesCS7A01G526600.1 | EnsemblPlantsGene:TraesCS7A01G526600 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
PANTHER:PTHR10641:SF896 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:708326426..708327615
Molecular Weight (calculated)
31373.7 Da
IEP (calculated)
8.311
GRAVY (calculated)
-0.616
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGCDRIRGP WSPEEDGALR LLVERHGARN WTAIGRGVPG RSGKSCRLRW CNQLSPGVER RPFTAEEDAA IARAHARLGN RWAAIARLLR GRTDNAVKNH
101: WNCSLKRRLA DVGVAEEERP CKRASVTPES TSGSGSGSGS GSDRSDVSHG SVFGLGQVYR PVARAGGFEP ADCAMSRRHE VEREEAEDPL TSLSLSLPGT
201: ATEVQGFHHD SSHSHFHQPS PSPPSPPPPP APTSYPFSPE FAAVMQEMIR DEVRRYISGV GCGANLPSMP QVVDGVMRAA AERAGGVART Q
101: WNCSLKRRLA DVGVAEEERP CKRASVTPES TSGSGSGSGS GSDRSDVSHG SVFGLGQVYR PVARAGGFEP ADCAMSRRHE VEREEAEDPL TSLSLSLPGT
201: ATEVQGFHHD SSHSHFHQPS PSPPSPPPPP APTSYPFSPE FAAVMQEMIR DEVRRYISGV GCGANLPSMP QVVDGVMRAA AERAGGVART Q
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
Arabidopsis Description
AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.