Factsheet for Os01t0977300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041935_P001	Maize	nucleus	55.2	52.27
OQU75658	Sorghum	nucleus	55.6	48.77
TraesCS4D01G297900.1	Wheat	nucleus	48.0	46.33
TraesCS4B01G299000.1	Wheat	nucleus	47.2	45.56
TraesCS4A01G006100.1	Wheat	nucleus	47.6	43.59
CDX83109	Canola	nucleus	27.6	42.59
HORVU4Hr1G077230.1	Barley	nucleus	47.2	42.29
Os08t0450900-00	Rice	nucleus	26.8	33.5
Os02t0187700-00	Rice	nucleus	39.6	32.89
Os09t0106700-01	Rice	nucleus	41.2	32.29
Os06t0637500-02	Rice	cytosol, mitochondrion, nucleus	38.8	31.19
Os05t0350900-01	Rice	nucleus	24.8	29.38
Os01t0274800-01	Rice	nucleus	28.0	26.42
CDY43567	Canola	nucleus	22.0	25.35
Os03t0720800-01	Rice	nucleus	24.8	25.31
Os08t0435700-00	Rice	nucleus	25.2	24.42
Os11t0207600-00	Rice	nucleus, plastid	25.6	23.97
Os01t0850400-01	Rice	nucleus	29.6	17.92
CDX83108	Canola	cytosol	0.8	5.13
Os08t0435725-00	Rice	cytosol	0.4	1.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4327813	EMBL:AK110631	ProteinID:BAC57635.1	ProteinID:BAF07487.1
ProteinID:BAS76483.1	ProteinID:EAZ15029.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os01g0977300	EnsemblPlants:Os01t0977300-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF717	UniProt:Q84SF0	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000004467
RefSeq:XP_015644045.1	SEG:seg	:	:	:	:

Description

endosperm-specific gene 23Similar to MYB-related protein. (Os01t0977300-01)

Coordinates

chr1:-:43194032..43194869

Molecular Weight (calculated)

27340.8 Da

IEP (calculated)

10.520

GRAVY (calculated)

-0.439

Length

250 amino acids

Sequence
(BLAST)

001: MGMCSKTRKK GSWRAEEDAL LTRLVAQHGP HRWSIISGAI PGRSGKSCRL RWCNQLSPAV QHRPFTPQED ALLAAAHARH GNKWATIARL LPGRTDNSVK
101: NHWNSNLRRC LRRQAKFKSK DPDLLPDPIN IPPDCIVVLN DDDEPADRPV TPPAIIQAQA QETLPSLTLS LSLSLPGAAA AAAEVEVAPP PPRALAAASE
201: IQDGSSRSSS ASRVMLQVMR QMVREEVQRH TAQLAYSLMA LASCSRRPPN

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.