Factsheet for Os11t0207600-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004681_P001	Maize	nucleus	48.69	68.06
TraesCS4A01G211100.1	Wheat	nucleus	63.67	61.59
HORVU4Hr1G017040.2	Barley	nucleus	64.04	61.51
TraesCS4B01G105200.1	Wheat	nucleus	63.3	61.45
GSMUA_Achr3P16490_001	Banana	nucleus	38.2	60.71
TraesCS4D01G102100.1	Wheat	nucleus	62.55	60.29
Zm00001d049079_P001	Maize	nucleus	61.05	58.84
EES09660	Sorghum	nucleus	59.93	57.97
GSMUA_Achr9P08480_001	Banana	nucleus	49.06	51.17
GSMUA_Achr10P...	Banana	nucleus	41.95	43.08
GSMUA_Achr6P17630_001	Banana	nucleus	41.95	42.59
Os03t0720800-01	Rice	nucleus	37.08	40.41
CDY71713	Canola	nucleus	34.46	40.0
Os01t0274800-01	Rice	nucleus	38.95	39.25
GSMUA_Achr3P18970_001	Banana	nucleus	37.45	38.17
CDX68977	Canola	nucleus	35.58	38.0
AT4G33450.1	Thale cress	nucleus	35.21	37.6
CDY28302	Canola	nucleus	35.21	37.45
CDX75353	Canola	nucleus	35.21	37.45
Bra034565.1-P	Field mustard	nucleus	35.21	37.45
Bra011441.1-P	Field mustard	nucleus	34.83	37.35
Solyc04g064540.2.1	Tomato	nucleus	43.07	37.22
PGSC0003DMT400063862	Potato	nucleus	41.95	37.09
KRH53362	Soybean	nucleus	44.94	36.25
KRH64569	Soybean	nucleus	45.32	35.8
VIT_04s0044g01380.t01	Wine grape	nucleus	40.45	35.76
Os08t0435700-00	Rice	nucleus	33.71	34.88
Os08t0450900-00	Rice	nucleus	19.85	26.5
Os01t0977300-01	Rice	nucleus	23.97	25.6
Os02t0187700-00	Rice	nucleus	25.47	22.59
Os09t0106700-01	Rice	nucleus	26.22	21.94
Os06t0637500-02	Rice	cytosol, mitochondrion, nucleus	25.09	21.54
Os01t0850400-01	Rice	nucleus	23.97	15.5
Os05t0350900-01	Rice	nucleus	7.87	9.95
Os08t0435725-00	Rice	cytosol	3.37	9.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4350036	ProteinID:ABA92043.1	ProteinID:BAF27830.1	ProteinID:BAT13139.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:2000652	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	EnsemblPlantsGene:Os11g0207600	EnsemblPlants:Os11t0207600-00	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF496	UniProt:Q2R933	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000009D790
RefSeq:XP_015615875.1	SEG:seg	:	:	:	:

Description

myb transcription factor 12, transcription factor MYB12Myb-like protein. (Os11t0207600-00)

Coordinates

chr11:+:5479730..5482703

Molecular Weight (calculated)

28816.5 Da

IEP (calculated)

10.410

GRAVY (calculated)

-0.625

Length

267 amino acids

Sequence
(BLAST)

001: MASSSTTNTS DGAGKPASSS SSACPRGHWR PGEDEKLRQL VEKYGPQNWN SIAEKLEGRS GKSCRLRWFN QLDPRINKRP FTEEEEERLL AAHRHHGNKW
101: ALIARHFPGR TDNAVKNHWH VVRARRSRER SRLLARAAAA AAHPPPFSSY ASQLDFSGGG ASSGARNSSL CFGFGMINRS SSSSSSPAAA PFLIKSFNGT
201: SYGTLLPATT SMAAAAQPVS TITFSSTPMR ETLELMDAGG HENHGDVDGG GDKRKGVPYF DFLGVGV

Best Arabidopsis Sequence Match ( AT1G17950.1 )
(BLAST)

001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC

Arabidopsis Description

MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.