Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034565.1-P | Field mustard | nucleus | 83.6 | 83.27 |
| CDY28302 | Canola | nucleus | 83.6 | 83.27 |
| CDY71713 | Canola | nucleus | 76.0 | 82.61 |
| CDX75353 | Canola | nucleus | 82.8 | 82.47 |
| Bra011441.1-P | Field mustard | nucleus | 82.0 | 82.33 |
| CDX68977 | Canola | nucleus | 82.0 | 82.0 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 32.8 | 48.81 |
| Zm00001d004681_P001 | Maize | nucleus | 35.2 | 46.07 |
| AT1G73410.1 | Thale cress | nucleus | 40.8 | 41.98 |
| Zm00001d041818_P001 | Maize | nucleus | 36.8 | 40.89 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 40.8 | 39.84 |
| AT1G17950.1 | Thale cress | nucleus | 39.2 | 39.36 |
| GSMUA_Achr10P... | Banana | nucleus | 40.0 | 38.46 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 39.2 | 37.26 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 38.4 | 36.64 |
| EES09660 | Sorghum | nucleus | 40.4 | 36.59 |
| Zm00001d049079_P001 | Maize | nucleus | 40.4 | 36.46 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 43.2 | 35.76 |
| EES15780 | Sorghum | nucleus | 36.0 | 35.71 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 39.2 | 35.64 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 39.2 | 35.51 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 39.2 | 35.38 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 39.2 | 35.25 |
| Os11t0207600-00 | Rice | nucleus, plastid | 37.6 | 35.21 |
| PGSC0003DMT400063862 | Potato | nucleus | 41.6 | 34.44 |
| AT5G39700.1 | Thale cress | nucleus | 25.6 | 33.68 |
| KRH53362 | Soybean | nucleus | 44.4 | 33.53 |
| Solyc04g064540.2.1 | Tomato | nucleus | 40.8 | 33.01 |
| KRH64569 | Soybean | nucleus | 43.6 | 32.25 |
| AT5G17800.1 | Thale cress | nucleus | 36.8 | 28.48 |
| AT3G29020.2 | Thale cress | nucleus | 33.2 | 27.21 |
| AT1G69560.2 | Thale cress | nucleus | 37.6 | 27.17 |
| AT1G26780.2 | Thale cress | nucleus | 37.2 | 25.91 |
| AT5G67300.1 | Thale cress | nucleus | 26.4 | 21.64 |
| AT2G23290.1 | Thale cress | nucleus | 26.4 | 21.36 |
| AT3G50060.1 | Thale cress | nucleus | 24.4 | 20.27 |
| AT4G37260.1 | Thale cress | nucleus | 25.2 | 19.69 |
| AT3G09230.1 | Thale cress | nucleus | 28.0 | 17.81 |
| AT2G39880.1 | Thale cress | nucleus | 25.2 | 17.17 |
| AT3G55730.1 | Thale cress | nucleus | 25.2 | 15.79 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:829482 | UniProt:A0A178UT14 | ProteinID:AEE86226.1 | ArrayExpress:AT4G33450 |
| EnsemblPlantsGene:AT4G33450 | RefSeq:AT4G33450 | TAIR:AT4G33450 | RefSeq:AT4G33450-TAIR-G | EnsemblPlants:AT4G33450.1 | TAIR:AT4G33450.1 |
| Symbol:ATMYB69 | EMBL:AY142517 | EMBL:AY519611 | ProteinID:CAB38803.1 | ProteinID:CAB80062.1 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:2000652 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_195071.1 | ProteinID:OAO96640.1 | PFAM:PF13921 | PO:PO:0000230 | PO:PO:0000272 |
| PO:PO:0005352 | PO:PO:0005848 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0009047 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF525 | UniProt:Q9SZC2 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00000AC1FD | : | : | : | : |
Description
ATMYB69MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2]
Coordinates
chr4:-:16095392..16096774
Molecular Weight (calculated)
28937.8 Da
IEP (calculated)
9.990
GRAVY (calculated)
-0.947
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMSRGSNSF DNKKPSCQRG HWRPVEDDNL RQLVEQYGPK NWNFIAQHLY GRSGKSCRLR WYNQLDPNIT KKPFTEEEEE RLLKAHRIQG NRWASIARLF
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
101: PGRTDNAVKN HFHVIMARRK RENFSSTATS TFNQTWHTVL SPSSSLTRLN RSHFGLWRYR KDKSCGLWPY SFVSPPTNGQ FGSSSVSNVH HEIYLERRKS
201: KELVDPQNYT FHAATPDHKM TSNEDGPSMG DDGEKNDVTF IDFLGVGLAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.