Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16490_001 | Banana | nucleus | 35.74 | 55.95 |
| Zm00001d004681_P001 | Maize | nucleus | 39.92 | 54.97 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 49.81 | 51.17 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 50.57 | 50.76 |
| GSMUA_Achr10P... | Banana | nucleus | 49.43 | 50.0 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 39.16 | 49.05 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 38.02 | 48.78 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 36.5 | 45.5 |
| Zm00001d041818_P001 | Maize | nucleus | 38.02 | 44.44 |
| GSMUA_Achr11P... | Banana | nucleus | 30.8 | 44.26 |
| Zm00001d049079_P001 | Maize | nucleus | 44.49 | 42.24 |
| Os11t0207600-00 | Rice | nucleus, plastid | 42.59 | 41.95 |
| TraesCS4D01G102100.1 | Wheat | nucleus | 44.11 | 41.88 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 43.73 | 41.82 |
| HORVU4Hr1G017040.2 | Barley | nucleus | 44.11 | 41.73 |
| EES09660 | Sorghum | nucleus | 43.73 | 41.67 |
| TraesCS4A01G211100.1 | Wheat | nucleus | 43.35 | 41.3 |
| CDY71713 | Canola | nucleus | 35.74 | 40.87 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 42.59 | 40.73 |
| CDX68977 | Canola | nucleus | 37.26 | 39.2 |
| AT4G33450.1 | Thale cress | nucleus | 37.26 | 39.2 |
| EES15780 | Sorghum | nucleus | 37.26 | 38.89 |
| VIT_04s0044g01380.t01 | Wine grape | nucleus | 44.49 | 38.74 |
| CDX75353 | Canola | nucleus | 36.88 | 38.65 |
| Bra011441.1-P | Field mustard | nucleus | 36.5 | 38.55 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 36.88 | 38.49 |
| Bra034565.1-P | Field mustard | nucleus | 36.5 | 38.25 |
| CDY28302 | Canola | nucleus | 36.5 | 38.25 |
| PGSC0003DMT400063862 | Potato | nucleus | 43.73 | 38.08 |
| KRH53362 | Soybean | nucleus | 47.53 | 37.76 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 42.59 | 37.09 |
| KRH64569 | Soybean | nucleus | 47.53 | 36.98 |
| Solyc04g064540.2.1 | Tomato | nucleus | 42.97 | 36.57 |
| GSMUA_Achr10P... | Banana | nucleus | 41.44 | 35.86 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 42.97 | 35.42 |
| GSMUA_Achr10P... | Banana | nucleus | 42.21 | 34.58 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 39.54 | 34.21 |
| GSMUA_Achr11P... | Banana | nucleus | 35.74 | 34.18 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 38.4 | 33.44 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 42.59 | 32.37 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 41.06 | 30.51 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 23.57 | 27.56 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 28.14 | 27.51 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 40.3 | 26.9 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 27.0 | 26.69 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 28.14 | 26.24 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 27.76 | 25.17 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 27.38 | 24.32 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 26.24 | 23.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.48 | 23.67 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 26.62 | 23.57 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 25.48 | 23.26 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 26.62 | 23.18 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 40.68 | 22.77 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 26.24 | 21.43 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 25.1 | 16.62 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P17630_001 | EnsemblPlants:GSMUA_Achr6T17630_001 | EnsemblPlantsGene:GSMUA_Achr6G17630_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF496 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294CE16 | UniProt:M0T7W1 | MapMan:15.5.2.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17630_001]
Coordinates
chr6:+:11864241..11865291
Molecular Weight (calculated)
29668.8 Da
IEP (calculated)
10.961
GRAVY (calculated)
-0.770
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTSASAGS GDAKACPRGH WRPGEDERLR QLVQQFGPQN WNSIAEKLKG RSGKSCRLRW FNQLDPRINR RPFTEEEEER LLAAQQVQGN KWALIARLFP
101: GRTDNAVKNH WHVIMARRHR ERSKLFRKSA IFPDQIHPVS APQEGSHRRH LRFGSDSDFR VVSPSGFMLW RAFSGSRDYP STPKCSSGVL LDSSQLHGRS
201: LRPHHQAYRS LSVDANCSDY AVSARDMARD GSDSANSRAI SEQINDRSKK VAFIDFLGVG ITS
101: GRTDNAVKNH WHVIMARRHR ERSKLFRKSA IFPDQIHPVS APQEGSHRRH LRFGSDSDFR VVSPSGFMLW RAFSGSRDYP STPKCSSGVL LDSSQLHGRS
201: LRPHHQAYRS LSVDANCSDY AVSARDMARD GSDSANSRAI SEQINDRSKK VAFIDFLGVG ITS
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.