Factsheet for GSMUA_Achr9P15750_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P07700_001	Banana	nucleus	69.19	71.22
GSMUA_Achr9P29090_001	Banana	nucleus	49.29	49.52
GSMUA_Achr3P16490_001	Banana	nucleus	35.55	44.64
GSMUA_Achr11P...	Banana	nucleus	34.6	39.89
GSMUA_Achr3P18970_001	Banana	nucleus	46.92	37.79
GSMUA_Achr5P27750_001	Banana	nucleus	45.02	37.7
GSMUA_Achr10P...	Banana	nucleus	45.02	36.54
GSMUA_Achr6P17630_001	Banana	nucleus	45.5	36.5
GSMUA_Achr9P08480_001	Banana	nucleus	43.6	35.94
GSMUA_Achr6P15900_001	Banana	nucleus	44.08	33.82
GSMUA_Achr10P...	Banana	nucleus	45.5	31.58
GSMUA_Achr9P04990_001	Banana	nucleus	45.02	31.46
GSMUA_Achr10P...	Banana	nucleus	46.45	30.53
GSMUA_Achr9P17000_001	Banana	nucleus	43.13	29.93
GSMUA_Achr3P09490_001	Banana	nucleus	44.55	29.47
GSMUA_Achr11P...	Banana	nucleus	37.91	29.09
GSMUA_Achr5P23290_001	Banana	nucleus	40.28	28.15
GSMUA_Achr6P32250_001	Banana	nucleus	45.5	27.75
GSMUA_Achr6P02580_001	Banana	nucleus	45.5	27.12
GSMUA_Achr6P33470_001	Banana	nucleus	28.91	27.11
GSMUA_Achr4P20150_001	Banana	nucleus	31.75	24.91
GSMUA_Achr1P26140_001	Banana	nucleus	32.7	24.47
GSMUA_Achr3P13070_001	Banana	nucleus	31.75	23.1
GSMUA_Achr4P12950_001	Banana	nucleus	28.91	22.93
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	42.65	22.84
GSMUA_Achr1P09750_001	Banana	nucleus	29.38	20.88
GSMUA_Achr4P09450_001	Banana	nucleus	29.86	20.86
GSMUA_AchrUn_...	Banana	nucleus	27.96	20.85
GSMUA_Achr9P22600_001	Banana	nucleus	28.44	20.83
GSMUA_Achr3P28230_001	Banana	nucleus	27.96	20.49
GSMUA_Achr8P25220_001	Banana	nucleus	28.44	20.27
GSMUA_Achr9P03720_001	Banana	nucleus	30.33	19.88
GSMUA_Achr7P18390_001	Banana	nucleus, plastid	40.28	18.09
GSMUA_Achr5P28780_001	Banana	nucleus	30.33	16.12

Protein Annotations

EnsemblPlants:GSMUA_Achr9P15750_001	EnsemblPlants:GSMUA_Achr9T15750_001	EnsemblPlantsGene:GSMUA_Achr9G15750_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF578	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000294C4C5	UniProt:M0U0N2	MapMan:15.5.2.1	:	:

Description

MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G15750_001]

Coordinates

chr9:+:10441720..10443140

Molecular Weight (calculated)

24975.5 Da

IEP (calculated)

9.578

GRAVY (calculated)

-0.979

Length

211 amino acids

Sequence
(BLAST)

001: MNTKCHWMPA EDDKLKVLVT KYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRKPFT KDEDQLLLAA HEIYGNRWAI IARLFPGRTD NAVKNHWHVI
101: MVRRHKQRSQ LPRKRGDQST FVEEEESKSS KKRKLEPRNT LLMTFFYVSL NSISIDGKDN SLKFYDFLQV NSDSDSTPED VRREGEERYE DKEEENKSHA
201: RFIDFLEVGS F

Best Arabidopsis Sequence Match ( AT1G73410.1 )
(BLAST)

001: MIMCSRGHWR PAEDEKLKDL VEQYGPHNWN AIALKLPGRS GKSCRLRWFN QLDPRINRNP FTEEEEERLL AAHRIHGNRW SIIARLFPGR TDNAVKNHWH
101: VIMARRTRQT SKPRLLPSTT SSSSLMASEQ IMMSSGGYNH NYSSDDRKKI FPADFINFPY KFSHINHLHF LKEFFTGKIA LNHKANQSKK PMEFYNFLQV
201: NTDSNKSEII DQDSGQSKRS DSDTKHESHV PFFDFLSVGN SAS

Arabidopsis Description

ATMYB54MYB54 [Source:UniProtKB/TrEMBL;Acc:A0A178WGB1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.