Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35992 | Canola | nucleus | 45.71 | 61.15 |
| CDY21728 | Canola | nucleus | 44.76 | 59.87 |
| VIT_17s0000g01890.t01 | Wine grape | nucleus | 59.05 | 56.11 |
| CDX83880 | Canola | nucleus | 46.19 | 53.3 |
| KRH38975 | Soybean | nucleus | 60.0 | 53.16 |
| KRH09502 | Soybean | nucleus | 58.57 | 52.56 |
| EER93554 | Sorghum | nucleus | 59.52 | 52.3 |
| Zm00001d033815_P001 | Maize | nucleus | 60.0 | 50.81 |
| HORVU4Hr1G008640.1 | Barley | nucleus | 58.57 | 50.62 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 40.48 | 50.6 |
| Zm00001d013399_P001 | Maize | nucleus | 57.62 | 50.42 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 49.05 | 50.24 |
| CDX72988 | Canola | nucleus | 53.81 | 50.0 |
| Bra015992.1-P | Field mustard | nucleus | 53.81 | 49.56 |
| CDX96475 | Canola | nucleus | 53.81 | 49.56 |
| TraesCS4B01G052400.2 | Wheat | nucleus | 58.57 | 49.4 |
| Os03t0720800-01 | Rice | nucleus | 57.62 | 49.39 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 49.52 | 49.29 |
| CDX96742 | Canola | nucleus | 56.19 | 48.76 |
| CDX82074 | Canola | nucleus | 53.81 | 48.5 |
| TraesCS4D01G052600.1 | Wheat | nucleus | 57.62 | 48.4 |
| PGSC0003DMT400079714 | Potato | nucleus | 55.71 | 47.95 |
| Bra016575.1-P | Field mustard | nucleus | 55.24 | 47.93 |
| CDY58312 | Canola | nucleus | 53.33 | 47.86 |
| Bra008096.1-P | Field mustard | nucleus | 53.33 | 47.86 |
| AT1G73410.1 | Thale cress | nucleus | 55.24 | 47.74 |
| AT1G17950.1 | Thale cress | nucleus | 56.19 | 47.39 |
| CDX81853 | Canola | nucleus | 55.71 | 47.37 |
| CDY21727 | Canola | nucleus | 55.71 | 46.61 |
| Bra031008.1-P | Field mustard | nucleus | 54.76 | 46.56 |
| GSMUA_Achr11P... | Banana | nucleus | 38.57 | 44.26 |
| TraesCS4A01G262500.3 | Wheat | nucleus | 57.14 | 43.48 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 50.48 | 41.41 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 49.05 | 39.16 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 48.57 | 38.93 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 46.67 | 38.89 |
| GSMUA_Achr10P... | Banana | nucleus | 48.1 | 38.85 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 47.14 | 36.0 |
| GSMUA_Achr10P... | Banana | nucleus | 49.05 | 33.88 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 47.14 | 32.78 |
| GSMUA_Achr11P... | Banana | nucleus | 42.38 | 32.36 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 45.71 | 31.58 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 47.14 | 31.03 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 44.29 | 30.79 |
| GSMUA_Achr10P... | Banana | nucleus | 46.67 | 30.53 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 49.05 | 29.77 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 47.62 | 28.25 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 29.52 | 27.56 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 47.14 | 25.13 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 31.9 | 24.91 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 30.95 | 24.44 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 32.86 | 23.79 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 31.9 | 23.76 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 30.95 | 22.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.52 | 21.91 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 30.95 | 21.89 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 30.48 | 21.19 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 29.05 | 21.18 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 29.52 | 20.95 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 30.0 | 19.57 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 41.43 | 18.51 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 31.43 | 16.62 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P29090_001 | EnsemblPlants:GSMUA_Achr9T29090_001 | EnsemblPlantsGene:GSMUA_Achr9G29090_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| ncoils:Coil | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF578 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002961983 | UniProt:M0U4G6 | MapMan:15.5.2.1 | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G29090_001]
Coordinates
chr9:-:32857364..32858178
Molecular Weight (calculated)
24525.5 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.997
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSRGHWRPE EDEKLKELVS RFGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT EEEEERLLAS HRVHGNRWAA IARLFPGRTD NAVKNHWHVI
101: MARRHRKATA KSIYTATARS TEAKDKGSES RHIYNHLKLL PKAFFSDLHD HIPQMAKDGE SSTEFYDFLQ VNTESDGAKC HSSVEEQEEE EEEEAEEEWR
201: KAGVPFIDFL
101: MARRHRKATA KSIYTATARS TEAKDKGSES RHIYNHLKLL PKAFFSDLHD HIPQMAKDGE SSTEFYDFLQ VNTESDGAKC HSSVEEQEEE EEEEAEEEWR
201: KAGVPFIDFL
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.