Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16490_001 | Banana | nucleus | 29.82 | 48.81 |
| GSMUA_Achr11P... | Banana | nucleus | 31.64 | 47.54 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 32.36 | 42.38 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 31.27 | 41.95 |
| Os08t0435700-00 | Rice | nucleus | 36.73 | 39.15 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 34.91 | 38.1 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 29.09 | 37.91 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 37.82 | 37.82 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 33.82 | 36.33 |
| GSMUA_Achr10P... | Banana | nucleus | 34.18 | 36.15 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 39.27 | 35.76 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 39.27 | 35.76 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 34.18 | 35.74 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 33.09 | 34.73 |
| GSMUA_Achr10P... | Banana | nucleus | 37.82 | 34.21 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 37.09 | 33.55 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 42.55 | 33.05 |
| GSMUA_Achr10P... | Banana | nucleus | 38.18 | 32.71 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 37.82 | 32.6 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 40.73 | 31.64 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 39.64 | 31.5 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 40.36 | 31.36 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 40.36 | 31.36 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 40.73 | 29.32 |
| Solyc05g007870.1.1 | Tomato | nucleus | 43.64 | 28.78 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 23.27 | 28.44 |
| PGSC0003DMT400047415 | Potato | nucleus | 43.27 | 27.74 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 37.09 | 26.7 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 37.09 | 25.89 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 24.0 | 24.81 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 24.0 | 24.54 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 39.27 | 22.98 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 23.27 | 22.7 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 23.64 | 22.41 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 24.0 | 22.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.55 | 21.91 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 22.55 | 21.53 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 22.18 | 21.18 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 22.55 | 20.95 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 22.55 | 20.53 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 24.0 | 20.5 |
| OQU80507 | Sorghum | nucleus | 41.82 | 16.84 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 23.27 | 16.12 |
| Os08t0435725-00 | Rice | cytosol | 2.55 | 7.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P09160_001 | EnsemblPlants:GSMUA_Achr11T09160_001 | EnsemblPlantsGene:GSMUA_Achr11G09160_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294E544 | UniProt:M0RQP6 | MapMan:15.5.2.1 | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G09160_001]
Coordinates
chr11:-:7075580..7077032
Molecular Weight (calculated)
30892.0 Da
IEP (calculated)
8.492
GRAVY (calculated)
-0.620
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFMSSLSMN PSSAVDSRSP HEVGDSHADA TAEGNASGET ANEGGGQSSF CARSHWRPEE DCKLRELVAL HGPQNWKLIA AKLHGRSGKS CRLRWFNQLD
101: PRINRRAFSE EEEEKLMAAH RLYGNKWAMI ARFFPGRTDN AVKNHWHVLM ARKYREQSSA CRKRRLKRME EATLNTSGEE GSYDFLLGSN VPSNTGFCSN
201: NSVFWGGPAD DSSRFHSSTV LMTATCYHSD ISRVSSTESP PFTESTSVSP PFIDFLGLSF SWKYFSALLC KHSRY
101: PRINRRAFSE EEEEKLMAAH RLYGNKWAMI ARFFPGRTDN AVKNHWHVLM ARKYREQSSA CRKRRLKRME EATLNTSGEE GSYDFLLGSN VPSNTGFCSN
201: NSVFWGGPAD DSSRFHSSTV LMTATCYHSD ISRVSSTESP PFTESTSVSP PFIDFLGLSF SWKYFSALLC KHSRY
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.