Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P09490_001 | Banana | nucleus | 74.01 | 70.53 |
| GSMUA_Achr11P... | Banana | nucleus | 38.49 | 63.93 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 56.91 | 62.91 |
| GSMUA_Achr10P... | Banana | nucleus | 61.51 | 61.51 |
| GSMUA_Achr10P... | Banana | nucleus | 53.62 | 50.78 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 27.96 | 50.6 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 57.24 | 50.29 |
| Os01t0274800-01 | Rice | nucleus | 43.75 | 50.19 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 49.67 | 50.0 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 30.92 | 45.85 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 31.58 | 45.71 |
| EES02758 | Sorghum | nucleus | 45.39 | 45.54 |
| Zm00001d008251_P002 | Maize | nucleus | 44.74 | 45.48 |
| Zm00001d040423_P001 | Maize | nucleus | 44.08 | 44.97 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 36.18 | 43.65 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 29.93 | 43.13 |
| Bra039036.1-P | Field mustard | nucleus | 27.3 | 43.01 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 44.08 | 42.81 |
| EES02759 | Sorghum | nucleus | 39.47 | 42.55 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 44.41 | 42.06 |
| Zm00001d040426_P001 | Maize | nucleus | 37.83 | 41.37 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 43.75 | 40.92 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 44.08 | 40.61 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 34.21 | 39.54 |
| AT5G39700.1 | Thale cress | nucleus | 24.67 | 39.47 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 32.89 | 39.06 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 33.55 | 38.93 |
| CDY67808 | Canola | nucleus | 19.74 | 37.74 |
| GSMUA_Achr11P... | Banana | nucleus | 33.55 | 37.09 |
| GSMUA_Achr10P... | Banana | nucleus | 31.58 | 36.92 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 35.2 | 35.43 |
| CDY44415 | Canola | nucleus | 29.93 | 34.87 |
| Bra025652.1-P | Field mustard | nucleus | 29.61 | 34.75 |
| CDY30264 | Canola | nucleus | 29.28 | 34.23 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 37.83 | 32.49 |
| CDY20004 | Canola | nucleus | 30.59 | 32.4 |
| Bra033078.1-P | Field mustard | nucleus | 29.93 | 31.82 |
| AT3G29020.2 | Thale cress | nucleus | 31.91 | 31.8 |
| CDY66025 | Canola | nucleus | 29.93 | 31.6 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 38.82 | 29.95 |
| CDY66170 | Canola | nucleus | 30.59 | 29.62 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 20.72 | 28.0 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 23.68 | 26.77 |
| CDX74436 | Canola | nucleus | 29.61 | 24.93 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 23.03 | 24.82 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 21.71 | 24.81 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 22.7 | 23.79 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 22.7 | 23.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.38 | 22.97 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 22.7 | 22.85 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 34.54 | 22.34 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 21.05 | 22.22 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 20.72 | 21.88 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 20.39 | 20.95 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 21.05 | 19.88 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 20.07 | 15.37 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P17000_001 | EnsemblPlants:GSMUA_Achr9T17000_001 | EnsemblPlantsGene:GSMUA_Achr9G17000_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002951307 | UniProt:M0U107 | MapMan:15.5.2.1 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G17000_001]
Coordinates
chr9:-:11543943..11545344
Molecular Weight (calculated)
33953.7 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.725
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MALNQLKPTA DKGFFPPPPP PPPFLKALSS PSGERECMSV EQGWRLQGLK SWQEHHKGEE TNDHGEEDEG GSGATDESVE QHKLCARGHW RPAEDAKLKE
101: LVSQYGPQNW NLIAENLQGR SGKSCRLRWF NQLDPRINRR AFSEEEEERL LAARRLYGNK WALIARLFPG RTDNGVKNHW HVIMARTKRE QSNDESASTC
201: TTELSLNSFT TMVAANSLNR HSPPHRAHLH DPVIGTFPHA SGFLCCGAPI RWIPGFNQSA CSANPENSAN GPVDYHMTSA WLDGDVREKI GLPFIDFLGV
301: GTTT
101: LVSQYGPQNW NLIAENLQGR SGKSCRLRWF NQLDPRINRR AFSEEEEERL LAARRLYGNK WALIARLFPG RTDNGVKNHW HVIMARTKRE QSNDESASTC
201: TTELSLNSFT TMVAANSLNR HSPPHRAHLH DPVIGTFPHA SGFLCCGAPI RWIPGFNQSA CSANPENSAN GPVDYHMTSA WLDGDVREKI GLPFIDFLGV
301: GTTT
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.