Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0274800-01 | Rice | nucleus | 46.04 | 48.3 |
| Zm00001d004681_P001 | Maize | nucleus | 32.73 | 47.64 |
| EES02759 | Sorghum | nucleus | 46.76 | 46.1 |
| Zm00001d040423_P001 | Maize | nucleus | 47.84 | 44.63 |
| Zm00001d008251_P002 | Maize | nucleus | 47.48 | 44.15 |
| Zm00001d041818_P001 | Maize | nucleus | 35.25 | 43.56 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 46.4 | 41.21 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 40.29 | 40.73 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 36.69 | 40.48 |
| Zm00001d013399_P001 | Maize | nucleus | 34.89 | 40.42 |
| Zm00001d033815_P001 | Maize | nucleus | 35.97 | 40.32 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 46.4 | 40.19 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 43.17 | 39.74 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 46.4 | 39.69 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 46.4 | 39.09 |
| GSMUA_Achr10P... | Banana | nucleus | 42.45 | 38.82 |
| Zm00001d049079_P001 | Maize | nucleus | 37.77 | 37.91 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 41.37 | 37.83 |
| GSMUA_Achr10P... | Banana | nucleus | 42.45 | 36.76 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 41.37 | 36.05 |
| Zm00001d040428_P001 | Maize | nucleus | 36.33 | 35.69 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 43.88 | 35.26 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 40.65 | 29.58 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 41.01 | 28.93 |
| Zm00001d005300_P001 | Maize | nucleus | 25.54 | 24.91 |
| Zm00001d041935_P001 | Maize | nucleus | 23.02 | 24.24 |
| Zm00001d015614_P001 | Maize | nucleus | 26.26 | 24.01 |
| Zm00001d046632_P001 | Maize | nucleus | 25.9 | 23.68 |
| Zm00001d036768_P001 | Maize | nucleus | 25.54 | 23.05 |
| Zm00001d019712_P001 | Maize | nucleus | 26.62 | 21.45 |
| Zm00001d037999_P001 | Maize | nucleus | 19.06 | 18.21 |
| Zm00001d012379_P001 | Maize | nucleus | 26.26 | 18.2 |
| Zm00001d037994_P001 | Maize | nucleus | 21.94 | 16.53 |
| Zm00001d037998_P001 | Maize | nucleus | 18.7 | 16.2 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103650011 | MapMan:15.5.2.1 | UniProt:A0A1D6MQP3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | ProteinID:ONM31329.1 |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF941 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00022182FC | EnsemblPlantsGene:Zm00001d040426 | EnsemblPlants:Zm00001d040426_P001 | EnsemblPlants:Zm00001d040426_T001 | SEG:seg |
Description
MYB-transcription factor 43myb domain protein 56
Coordinates
chr3:-:42867274..42868539
Molecular Weight (calculated)
29552.8 Da
IEP (calculated)
10.756
GRAVY (calculated)
-0.501
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPVAAAL SALHEAQETH GHDDSRAGHA RGHWRPAEDA KLKDLVALYG PKNWNLIASK LHGRSGKSCR LRWFNQLDPR VNRRPFSAAE EQRLVAAHRA
101: HGNKWALIAR LFPGRTDNAV KNHWHVLTAR RQRERTGAPP RRRKPSSSSP AAHHHRAPSP LPFCAGKATR PRSCGDGDGD GGGSDESASS TSSGTDLSSL
201: GSVCAAAVPC FHFHRRRQSQ SSCDGTTCAC LLGSSSASPL LRCIMLRSVP SPAAASDGGG CGKLAALPFF DFLGVGAT
101: HGNKWALIAR LFPGRTDNAV KNHWHVLTAR RQRERTGAPP RRRKPSSSSP AAHHHRAPSP LPFCAGKATR PRSCGDGDGD GGGSDESASS TSSGTDLSSL
201: GSVCAAAVPC FHFHRRRQSQ SSCDGTTCAC LLGSSSASPL LRCIMLRSVP SPAAASDGGG CGKLAALPFF DFLGVGAT
001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.