Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008251_P002 | Maize | nucleus | 84.56 | 84.28 |
| EES02758 | Sorghum | nucleus | 84.9 | 83.5 |
| Os01t0274800-01 | Rice | nucleus | 58.39 | 65.66 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 65.77 | 62.62 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 65.44 | 60.75 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 65.77 | 60.31 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 66.11 | 59.7 |
| Zm00001d004681_P001 | Maize | nucleus | 32.55 | 50.79 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 44.63 | 48.36 |
| Zm00001d040426_P001 | Maize | nucleus | 44.63 | 47.84 |
| GSMUA_Achr10P... | Banana | nucleus | 47.32 | 46.38 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 45.64 | 45.03 |
| GSMUA_Achr10P... | Banana | nucleus | 48.32 | 44.86 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 37.92 | 44.84 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 44.97 | 44.08 |
| Zm00001d041818_P001 | Maize | nucleus | 32.89 | 43.56 |
| Zm00001d033815_P001 | Maize | nucleus | 34.23 | 41.13 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 43.96 | 41.07 |
| Zm00001d013399_P001 | Maize | nucleus | 32.89 | 40.83 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 47.32 | 40.75 |
| Zm00001d049079_P001 | Maize | nucleus | 36.91 | 39.71 |
| Zm00001d040428_P001 | Maize | nucleus | 35.91 | 37.81 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 43.29 | 33.77 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 39.93 | 30.2 |
| Zm00001d005300_P001 | Maize | nucleus | 24.5 | 25.61 |
| Zm00001d015614_P001 | Maize | nucleus | 25.84 | 25.33 |
| Zm00001d041935_P001 | Maize | nucleus | 21.81 | 24.62 |
| Zm00001d046632_P001 | Maize | nucleus | 24.5 | 24.01 |
| Zm00001d036768_P001 | Maize | nucleus | 24.16 | 23.38 |
| Zm00001d019712_P001 | Maize | nucleus | 26.51 | 22.9 |
| Zm00001d037999_P001 | Maize | nucleus | 18.46 | 18.9 |
| Zm00001d037998_P001 | Maize | nucleus | 19.13 | 17.76 |
| Zm00001d012379_P001 | Maize | nucleus | 23.83 | 17.71 |
| Zm00001d037994_P001 | Maize | nucleus | 20.47 | 16.53 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100381481 | MapMan:15.5.2.1 | EMBL:BT061368 | UniProt:C0HGB2 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EMBL:HQ858799 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | ProteinID:ONM31328.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF941 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001948753 | EnsemblPlantsGene:Zm00001d040423 | EnsemblPlants:Zm00001d040423_P001 |
| EnsemblPlants:Zm00001d040423_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 44myb domain protein 56
Coordinates
chr3:-:42817665..42819244
Molecular Weight (calculated)
32189.2 Da
IEP (calculated)
8.278
GRAVY (calculated)
-0.636
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFFAAAPP PAAGALASFH HEEQQRQDAA EELYHVDDDV GEGGCGAGQQ GKLCARGHWR PAEDAKLKEL VAQYGPQNWN LIAERLDGRS GKSCRLRWFN
101: QLDPRINRRA FSGEEEERLL AAHRAYGNKW ALIARLFPGR TDNAVKNHWH VLMARKQREH TGALRRRKPS SSPDPAPPTS HLAPVVVLHH HHHQHHAGSP
201: PRTVAAAHAQ YTAADTRAHS GGESDETAST CTTDLSLGSA AAPCFYQSGY DAAPRAAAFA PSARSAFSAP PASARHGESR SDDKASPPFF DFLGVGAA
101: QLDPRINRRA FSGEEEERLL AAHRAYGNKW ALIARLFPGR TDNAVKNHWH VLMARKQREH TGALRRRKPS SSPDPAPPTS HLAPVVVLHH HHHQHHAGSP
201: PRTVAAAHAQ YTAADTRAHS GGESDETAST CTTDLSLGSA AAPCFYQSGY DAAPRAAAFA PSARSAFSAP PASARHGESR SDDKASPPFF DFLGVGAA
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.