Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02758 | Sorghum | nucleus | 87.29 | 86.14 |
| Zm00001d040423_P001 | Maize | nucleus | 84.28 | 84.56 |
| Os01t0274800-01 | Rice | nucleus | 60.2 | 67.92 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 66.56 | 63.58 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 65.55 | 61.06 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 66.22 | 60.92 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 65.55 | 59.39 |
| Zm00001d004681_P001 | Maize | nucleus | 32.44 | 50.79 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 43.81 | 47.64 |
| Zm00001d040426_P001 | Maize | nucleus | 44.15 | 47.48 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 46.15 | 45.7 |
| GSMUA_Achr10P... | Banana | nucleus | 46.15 | 45.39 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 45.48 | 44.74 |
| GSMUA_Achr10P... | Banana | nucleus | 47.83 | 44.55 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 37.46 | 44.44 |
| Zm00001d041818_P001 | Maize | nucleus | 32.78 | 43.56 |
| Zm00001d033815_P001 | Maize | nucleus | 34.45 | 41.53 |
| Zm00001d013399_P001 | Maize | nucleus | 33.11 | 41.25 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 43.81 | 41.07 |
| Zm00001d049079_P001 | Maize | nucleus | 37.79 | 40.79 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 47.16 | 40.75 |
| Zm00001d040428_P001 | Maize | nucleus | 35.45 | 37.46 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 42.47 | 33.25 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 40.13 | 30.46 |
| Zm00001d005300_P001 | Maize | nucleus | 23.75 | 24.91 |
| Zm00001d015614_P001 | Maize | nucleus | 25.08 | 24.67 |
| Zm00001d041935_P001 | Maize | nucleus | 21.74 | 24.62 |
| Zm00001d046632_P001 | Maize | nucleus | 24.41 | 24.01 |
| Zm00001d036768_P001 | Maize | nucleus | 24.08 | 23.38 |
| Zm00001d019712_P001 | Maize | nucleus | 25.42 | 22.03 |
| Zm00001d037999_P001 | Maize | nucleus | 19.06 | 19.59 |
| Zm00001d012379_P001 | Maize | nucleus | 24.75 | 18.45 |
| Zm00001d037998_P001 | Maize | nucleus | 18.73 | 17.45 |
| Zm00001d037994_P001 | Maize | nucleus | 21.07 | 17.07 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | ProteinID:AQK89320.1 | ProteinID:AQK89321.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7USW0 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002212104 | EnsemblPlantsGene:Zm00001d008251 | EnsemblPlants:Zm00001d008251_P002 | EnsemblPlants:Zm00001d008251_T002 | SEG:seg |
Description
MYB-transcription factor 60Putative MYB DNA-binding domain superfamily protein
Coordinates
chr8:+:2928345..2930423
Molecular Weight (calculated)
32322.5 Da
IEP (calculated)
7.544
GRAVY (calculated)
-0.573
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFFGAAPP PALASFRHEE EQHQDAAEEV YHVDDVDEGS GDGRGHGGAG QGKLCARGHW RPAEDAKLKE LVAQFGPQNW NLIAERLDGR SGKSCRLRWF
101: NQLDPRINRR AFSEEEEERL LAAHRAYGNK WALIARLFPG RTDNAVKNHW HVLMARRQRE HSGALRRRKP SSTSPSPAPA PAPHLAPVVV LHHHHHYAGG
201: SPPMPPLHAA DAHTQYTAAA ADTRAHSGGE SDETASTCTT DLSLASAAPC FYQSGYDVAP RAAAFAPSAR SAFSAPPATA RSDDKVSLPF FDFLGVGAA
101: NQLDPRINRR AFSEEEEERL LAAHRAYGNK WALIARLFPG RTDNAVKNHW HVLMARRQRE HSGALRRRKP SSTSPSPAPA PAPHLAPVVV LHHHHHYAGG
201: SPPMPPLHAA DAHTQYTAAA ADTRAHSGGE SDETASTCTT DLSLASAAPC FYQSGYDVAP RAAAFAPSAR SAFSAPPATA RSDDKVSLPF FDFLGVGAA
001: MNPNLLEKDL RGKETTNGSI RYKEANNFRS LPNSHTAACK TSLNNPSISR NHPHNKSASV LESEDEHGNE RGENEKSLRM RGKSGINTKV CSRGHWRPTE
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
101: DAKLKELVAQ FGPQNWNLIS NHLLGRSGKS CRLRWFNQLD PRINKRAFTE EEEFRLLAAH RAYGNKWALI SRLFPGRTDN AVKNHWHVIM ARRTRESQRQ
201: RQQPPPTLSR DAEMTVSSSC RYNQGKFINE EDDDDDVSAV STCTTELSLT PPSSAYQPRF FNYDSTLASG KDGQCVQRAE VNGIYGKKMD HQNHHTISVS
301: ERKVEMKMRS GYYYFDFLGV GAS
Arabidopsis Description
MYB56Transcription factor MYB56 [Source:UniProtKB/Swiss-Prot;Acc:Q6R053]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.