Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P04990_001 | Banana | nucleus | 64.45 | 73.84 |
| GSMUA_Achr10P... | Banana | nucleus | 63.29 | 68.22 |
| GSMUA_Achr11P... | Banana | nucleus | 34.39 | 65.03 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 50.87 | 64.0 |
| GSMUA_Achr10P... | Banana | nucleus | 52.6 | 59.87 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 52.89 | 57.37 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 50.29 | 57.24 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 25.72 | 52.98 |
| Os01t0274800-01 | Rice | nucleus | 40.46 | 52.83 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 29.77 | 49.05 |
| EES02759 | Sorghum | nucleus | 39.31 | 48.23 |
| Bra039036.1-P | Field mustard | nucleus | 26.59 | 47.67 |
| EES02758 | Sorghum | nucleus | 41.62 | 47.52 |
| Zm00001d040423_P001 | Maize | nucleus | 40.75 | 47.32 |
| Zm00001d008251_P002 | Maize | nucleus | 40.75 | 47.16 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 27.75 | 46.83 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 33.81 | 46.43 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 27.75 | 45.5 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 39.88 | 44.09 |
| Zm00001d040426_P001 | Maize | nucleus | 35.26 | 43.88 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 39.6 | 42.68 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 32.37 | 42.59 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 39.6 | 42.15 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 31.79 | 41.98 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 39.88 | 41.82 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 30.35 | 41.02 |
| GSMUA_Achr11P... | Banana | nucleus | 31.5 | 39.64 |
| AT5G39700.1 | Thale cress | nucleus | 21.68 | 39.47 |
| GSMUA_Achr10P... | Banana | nucleus | 29.48 | 39.23 |
| CDY67808 | Canola | nucleus | 17.92 | 38.99 |
| CDY44415 | Canola | nucleus | 27.75 | 36.78 |
| Bra025652.1-P | Field mustard | nucleus | 27.17 | 36.29 |
| CDY20004 | Canola | nucleus | 29.48 | 35.54 |
| CDY30264 | Canola | nucleus | 26.59 | 35.38 |
| CDY66025 | Canola | nucleus | 29.19 | 35.07 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 30.06 | 34.44 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 34.97 | 34.18 |
| Bra033078.1-P | Field mustard | nucleus | 27.75 | 33.57 |
| AT3G29020.2 | Thale cress | nucleus | 29.19 | 33.11 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 37.28 | 32.74 |
| CDY66170 | Canola | nucleus | 29.19 | 32.17 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 23.41 | 30.11 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 21.97 | 28.57 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 23.12 | 27.59 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 22.25 | 27.3 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 23.12 | 26.94 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 17.34 | 26.67 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 21.97 | 26.39 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 22.54 | 26.35 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 22.54 | 25.83 |
| CDX74436 | Canola | nucleus | 26.88 | 25.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.81 | 25.44 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 20.52 | 24.65 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 30.35 | 22.34 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 19.65 | 21.12 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 19.65 | 17.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P32250_001 | EnsemblPlants:GSMUA_Achr6T32250_001 | EnsemblPlantsGene:GSMUA_Achr6G32250_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294C6D4 | UniProt:M0TC19 | MapMan:15.5.2.1 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G32250_001]
Coordinates
chr6:+:31729295..31731339
Molecular Weight (calculated)
38199.2 Da
IEP (calculated)
8.508
GRAVY (calculated)
-0.823
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLPPVAPP FVTGSTHGER ECWGFQGLAE GHGNHGDRRS NREGKEEEAG YGHVHGNERQ HRPCARGHWR PDEDAKLKDL VSQHGPQNWN LIAEKLQGRS
101: GKSCRLRWFN QLDPRINRDA FSEEEEERLL AAHRLYGNKW ALIARLFPGR TDNAVKNHWH VIMARKQREQ SNACRRRRPS ASSSIPSLPH SLPNRKEVNP
201: SNNACSGEST ITSTRDESAS TCADLSLGSF TSRIVPSFPN GYSPSHQPHS YQAFNGSDGK VVTTSNRIYV KHGDSGGSFF THGVPKMLVP GFDQSDCTGT
301: GSASGASANE AVVYHMTNNT LHHGETEHGG EKIRLPFFDF LGVGAT
101: GKSCRLRWFN QLDPRINRDA FSEEEEERLL AAHRLYGNKW ALIARLFPGR TDNAVKNHWH VIMARKQREQ SNACRRRRPS ASSSIPSLPH SLPNRKEVNP
201: SNNACSGEST ITSTRDESAS TCADLSLGSF TSRIVPSFPN GYSPSHQPHS YQAFNGSDGK VVTTSNRIYV KHGDSGGSFF THGVPKMLVP GFDQSDCTGT
301: GSASGASANE AVVYHMTNNT LHHGETEHGG EKIRLPFFDF LGVGAT
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.