CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008251_P002	Maize	nucleus	86.14	87.29
Zm00001d040423_P001	Maize	nucleus	83.5	84.9
Os01t0274800-01	Rice	nucleus	58.42	66.79
TraesCS3B01G217100.1	Wheat	nucleus	67.33	65.18
TraesCS3D01G191400.1	Wheat	nucleus	66.01	62.31
TraesCS3A01G187800.1	Wheat	nucleus	66.67	62.15
EES02759	Sorghum	nucleus	56.44	60.64
HORVU3Hr1G038700.2	Barley	nucleus	65.35	60.0
GSMUA_Achr6P15900_001	Banana	nucleus	43.56	48.0
GSMUA_Achr9P04990_001	Banana	nucleus	45.54	45.7
GSMUA_Achr5P27750_001	Banana	nucleus	37.95	45.63
GSMUA_Achr9P17000_001	Banana	nucleus	45.54	45.39
GSMUA_Achr10P...	Banana	nucleus	45.21	45.07
GSMUA_Achr10P...	Banana	nucleus	47.52	44.86
EER93554	Sorghum	nucleus	33.99	43.1
GSMUA_Achr3P09490_001	Banana	nucleus	43.89	41.69
GSMUA_Achr6P32250_001	Banana	nucleus	47.52	41.62
EES02760	Sorghum	nucleus	36.3	41.2
EES09660	Sorghum	nucleus	35.97	39.49
EES15780	Sorghum	nucleus	32.34	38.89
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	39.6	30.46
EES13945	Sorghum	nucleus	18.48	24.89
EES04668	Sorghum	nucleus	26.4	24.46
EER90085	Sorghum	nucleus	25.08	24.28
OQU75658	Sorghum	nucleus	22.11	23.51
EER98550	Sorghum	nucleus	26.73	22.13
EES18041	Sorghum	nucleus	23.1	19.61
OQU80507	Sorghum	nucleus	42.9	19.03
OQU87862	Sorghum	nucleus	23.76	18.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:8054657	UniProt:C5XH76	EnsemblPlants:EES02758	ProteinID:EES02758
ProteinID:EES02758.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF941	InterPro:SANT/Myb	SMART:SM00717
EnsemblPlantsGene:SORBI_3003G128900	SUPFAM:SSF46689	UniParc:UPI0001A84F1A	RefSeq:XP_002457638.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:11965464..11967783

Molecular Weight (calculated)

32775.0 Da

IEP (calculated)

7.543

GRAVY (calculated)

-0.592

Length

303 amino acids

Sequence
(BLAST)

001: MAAFFGAAPP PPPPPGLASF HHHEEEEQQH HKDAAEEVYH VDDVDEGGAG QGKLCARGHW RPAEDAKLKE LVAQYGPQNW NLIAERLDGR SGKSCRLRWF
101: NQLDPRINRR AFSEEEEERL LAAHRAYGNK WALIARLFPG RTDNAVKNHW HVLMARKQRE QTGALRRRKP SSSSSSSPGP APTPHFAPVV VLHHHHYAGS
201: PPMPLHATAG AYTTAAAAAD TRAHSGGESD ETASTCTTDL SLGSAAAPCF YQSGYDVVPR AAAFAPSARS AFSAPSATAR HGEARSDDKV SLPFFDFLGV
301: GAA

Best Arabidopsis Sequence Match ( AT1G69560.2 )
(BLAST)

001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.