Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G191400.1 | Wheat | nucleus | 97.12 | 94.7 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 97.12 | 93.54 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 91.37 | 86.67 |
| Os01t0274800-01 | Rice | nucleus | 58.47 | 69.06 |
| EES02758 | Sorghum | nucleus | 65.18 | 67.33 |
| Zm00001d008251_P002 | Maize | nucleus | 63.58 | 66.56 |
| Zm00001d040423_P001 | Maize | nucleus | 62.62 | 65.77 |
| EES02759 | Sorghum | nucleus | 52.4 | 58.16 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 41.53 | 47.27 |
| Zm00001d040426_P001 | Maize | nucleus | 41.21 | 46.4 |
| Bra039036.1-P | Field mustard | nucleus | 28.43 | 46.11 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 43.13 | 44.7 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 42.81 | 44.08 |
| GSMUA_Achr10P... | Banana | nucleus | 42.49 | 43.75 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 35.14 | 43.65 |
| GSMUA_Achr10P... | Banana | nucleus | 42.81 | 41.74 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 42.49 | 41.69 |
| TraesCS4B01G052400.2 | Wheat | nucleus | 31.95 | 40.16 |
| TraesCS4B01G105200.1 | Wheat | nucleus | 35.14 | 40.0 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 44.09 | 39.88 |
| AT5G39700.1 | Thale cress | nucleus | 23.64 | 38.95 |
| CDY44415 | Canola | nucleus | 32.27 | 38.7 |
| Bra025652.1-P | Field mustard | nucleus | 30.35 | 36.68 |
| CDY20004 | Canola | nucleus | 32.59 | 35.54 |
| CDY30264 | Canola | nucleus | 29.39 | 35.38 |
| Bra033078.1-P | Field mustard | nucleus | 32.27 | 35.31 |
| CDY67808 | Canola | nucleus | 17.89 | 35.22 |
| CDY66025 | Canola | nucleus | 31.95 | 34.72 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 38.98 | 34.46 |
| AT3G29020.2 | Thale cress | nucleus | 32.59 | 33.44 |
| CDY66170 | Canola | nucleus | 32.27 | 32.17 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 37.7 | 29.95 |
| TraesCS7B01G444000.1 | Wheat | nucleus | 24.28 | 26.39 |
| CDX74436 | Canola | nucleus | 30.35 | 26.32 |
| TraesCS7B01G443800.1 | Wheat | nucleus | 24.28 | 25.76 |
| TraesCS6B01G201700.1 | Wheat | nucleus | 23.96 | 25.6 |
| TraesCS7B01G443900.1 | Wheat | nucleus | 23.96 | 25.17 |
| TraesCS4B01G299000.1 | Wheat | nucleus | 20.77 | 25.1 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 25.24 | 23.58 |
| TraesCS1B01G236900.1 | Wheat | nucleus | 19.49 | 20.13 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 24.28 | 16.24 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G217100.1 | EnsemblPlantsGene:TraesCS3B01G217100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:258720244..258721878
Molecular Weight (calculated)
34234.7 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.693
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAREMNGFFS HPPPPPPAPY QEEAAADVDD AEDGGGGQGK LCSRGHWRPA EDARLKELVG QYGPQNWNLI AEKLDGRSGK SCRLRWFNQL DPRINRRAFT
101: EEEEDRLMAA HRAYGNKWAL IARLFPGRTD NAVKNHWHVL MARRQREQSG AFRRRTKPAS ASSSSSIAPA PHYAGVVLQH QHQYQHHGAS PIPMPLQPFA
201: MGVAIATGMY SKAATATASR AYSGGESDES ASTCTTDLSL SSGNAAVPCF YHHQGYDMAP QAHAVTQAFS PSARSAFSAP SSSSARRQQQ QHEEEDGDKL
301: SLPFFDFLGV GST
101: EEEEDRLMAA HRAYGNKWAL IARLFPGRTD NAVKNHWHVL MARRQREQSG AFRRRTKPAS ASSSSSIAPA PHYAGVVLQH QHQYQHHGAS PIPMPLQPFA
201: MGVAIATGMY SKAATATASR AYSGGESDES ASTCTTDLSL SSGNAAVPCF YHHQGYDMAP QAHAVTQAFS PSARSAFSAP SSSSARRQQQ QHEEEDGDKL
301: SLPFFDFLGV GST
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.