Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20004 | Canola | nucleus | 96.53 | 96.86 |
| Bra039036.1-P | Field mustard | nucleus | 64.24 | 95.85 |
| CDY44415 | Canola | nucleus | 68.06 | 75.1 |
| AT3G29020.2 | Thale cress | nucleus | 78.12 | 73.77 |
| CDY66170 | Canola | nucleus | 77.78 | 71.34 |
| CDY30264 | Canola | nucleus | 46.88 | 51.92 |
| CDY35992 | Canola | nucleus | 25.69 | 47.13 |
| CDY21728 | Canola | nucleus | 25.35 | 46.5 |
| CDY67808 | Canola | nucleus | 25.35 | 45.91 |
| CDX83880 | Canola | nucleus | 26.39 | 41.76 |
| CDX96475 | Canola | nucleus | 30.21 | 38.16 |
| CDX72988 | Canola | nucleus | 29.86 | 38.05 |
| CDX74436 | Canola | nucleus | 46.53 | 37.12 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 32.29 | 36.9 |
| CDX82074 | Canola | nucleus | 29.51 | 36.48 |
| CDY58312 | Canola | nucleus | 29.51 | 36.32 |
| CDX96742 | Canola | nucleus | 30.21 | 35.95 |
| Os01t0274800-01 | Rice | nucleus | 32.64 | 35.47 |
| CDX81853 | Canola | nucleus | 30.21 | 35.22 |
| CDX83109 | Canola | nucleus | 19.79 | 35.19 |
| CDY71713 | Canola | nucleus | 27.78 | 34.78 |
| CDY21727 | Canola | nucleus | 30.21 | 34.66 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 31.94 | 33.45 |
| CDX68977 | Canola | nucleus | 28.47 | 32.8 |
| CDX72405 | Canola | nucleus | 27.43 | 32.78 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 33.68 | 32.12 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 34.72 | 31.95 |
| CDY28302 | Canola | nucleus | 27.78 | 31.87 |
| CDX75353 | Canola | nucleus | 27.78 | 31.87 |
| CDY07345 | Canola | nucleus | 32.64 | 31.54 |
| CDY46114 | Canola | nucleus | 26.39 | 31.54 |
| CDY67868 | Canola | nucleus | 32.29 | 31.21 |
| GSMUA_Achr10P... | Banana | nucleus | 32.64 | 30.92 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 34.72 | 30.77 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 34.03 | 30.53 |
| CDY16884 | Canola | nucleus | 32.99 | 30.45 |
| EES02760 | Sorghum | nucleus | 28.12 | 30.34 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 34.72 | 30.3 |
| CDX85443 | Canola | nucleus | 32.29 | 30.29 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 31.6 | 29.93 |
| CDY69058 | Canola | nucleus | 27.43 | 29.92 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 32.99 | 29.78 |
| CDY02687 | Canola | nucleus | 31.94 | 29.68 |
| GSMUA_Achr10P... | Banana | nucleus | 32.99 | 29.59 |
| CDY40941 | Canola | nucleus | 32.64 | 29.38 |
| CDY38460 | Canola | nucleus | 32.99 | 29.32 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 35.07 | 29.19 |
| CDX95921 | Canola | nucleus | 32.29 | 29.06 |
| Zm00001d040428_P001 | Maize | nucleus | 27.78 | 28.27 |
| CDX78761 | Canola | nucleus | 30.21 | 27.8 |
| CDY50737 | Canola | nucleus | 32.99 | 27.62 |
| CDX70776 | Canola | nucleus | 29.86 | 27.48 |
| CDY44993 | Canola | nucleus | 32.99 | 26.91 |
| CDY46444 | Canola | nucleus | 32.99 | 26.91 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 35.07 | 25.63 |
| CDY12830 | Canola | nucleus | 22.22 | 25.3 |
| CDY01420 | Canola | nucleus | 22.22 | 24.33 |
| CDY30608 | Canola | nucleus | 21.88 | 23.77 |
| CDX72621 | Canola | nucleus | 21.18 | 23.02 |
| CDY22442 | Canola | nucleus | 21.88 | 22.91 |
| CDY57355 | Canola | nucleus | 21.88 | 22.66 |
| CDY29542 | Canola | nucleus | 20.83 | 22.64 |
| CDY44045 | Canola | nucleus | 22.22 | 22.46 |
| CDY23023 | Canola | nucleus | 22.57 | 22.41 |
| CDY02098 | Canola | nucleus | 22.57 | 22.18 |
| CDY38933 | Canola | nucleus | 22.22 | 21.92 |
| CDX89554 | Canola | nucleus | 21.88 | 21.5 |
| CDX75635 | Canola | nucleus | 22.22 | 21.4 |
| CDX69287 | Canola | nucleus | 22.22 | 20.91 |
| CDX72208 | Canola | nucleus | 23.61 | 18.48 |
| CDX68566 | Canola | nucleus | 20.14 | 18.47 |
| CDY27271 | Canola | nucleus | 23.61 | 18.23 |
| CDX73963 | Canola | nucleus | 20.83 | 17.91 |
| CDY07907 | Canola | nucleus | 20.49 | 17.77 |
| CDY43567 | Canola | nucleus | 13.19 | 17.51 |
| CDY20494 | Canola | nucleus | 22.22 | 17.39 |
| CDX74825 | Canola | nucleus | 22.22 | 15.96 |
| CDY70901 | Canola | nucleus | 10.76 | 10.84 |
| CDY70773 | Canola | nucleus | 10.42 | 10.49 |
| CDX83108 | Canola | cytosol | 0.69 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JHN8 | UniProt:A0A078JHN8 | EnsemblPlants:CDY66025 | ProteinID:CDY66025 |
| ProteinID:CDY66025.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00051193001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF021D | SEG:seg |
Description
BnaCnng49340DBnaCnng49340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHN8]
Coordinates
chrLK035049:-:3488..4619
Molecular Weight (calculated)
32690.5 Da
IEP (calculated)
9.378
GRAVY (calculated)
-0.680
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDISFFQAYP FDLPCSRAFN GDGENNAVEF SNKRMMVKVS DESKKKQRGS RVCSRGHWRV SEDSQLTELV SVHGPQNWNH IAEKMQGRTG KSCRLRWFNQ
101: LDPRINKRVF SVEEEERLLA AHGAFGNKWA MIAKIFNGRT DNALKNHWHV LMARKLRQRS SSYTRRFNGS AHKPNADHTS FDISPGSVDD EEVNMEKNSW
201: KILKEGTTNM KAQYPQEEYC SPRMPMHGHY STFSADSLAL TLHVSIQEPS SSLSSLSLPS SSAEYTMVAT KPPAFIDFLG VGHQSLNI
101: LDPRINKRVF SVEEEERLLA AHGAFGNKWA MIAKIFNGRT DNALKNHWHV LMARKLRQRS SSYTRRFNGS AHKPNADHTS FDISPGSVDD EEVNMEKNSW
201: KILKEGTTNM KAQYPQEEYC SPRMPMHGHY STFSADSLAL TLHVSIQEPS SSLSSLSLPS SSAEYTMVAT KPPAFIDFLG VGHQSLNI
001: MKMDFSCFQE YPFEFHCRGT TFNGFRENNA VSETVEEFCN KRRMQKKSDD LKTKKKKKQS VSRVCSRGHW RISEDTQLME LVSVYGPQNW NHIAESMQGR
101: TGKSCRLRWF NQLDPRINKR AFSDEEEERL LAAHRAFGNK WAMIAKLFNG RTDNALKNHW HVLMARKMRQ QSSSYVQRFN GSAHESNTDH KIFNLSPGNV
201: DDDEDVNLKK CSWEMLKEGT TNLKAQYLQE EYSSSRMPMQ GPHHHYSTFP ADSLALTLHV SIQEPSSSSS LSLPSSSTTG EHTMVTRYFE TIKPPAFIDF
301: LGVGH
101: TGKSCRLRWF NQLDPRINKR AFSDEEEERL LAAHRAFGNK WAMIAKLFNG RTDNALKNHW HVLMARKMRQ QSSSYVQRFN GSAHESNTDH KIFNLSPGNV
201: DDDEDVNLKK CSWEMLKEGT TNLKAQYLQE EYSSSRMPMQ GPHHHYSTFP ADSLALTLHV SIQEPSSSSS LSLPSSSTTG EHTMVTRYFE TIKPPAFIDF
301: LGVGH
Arabidopsis Description
MYB110Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.