Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 23.35 | 50.27 |
| GSMUA_Achr3P16490_001 | Banana | nucleus | 20.81 | 48.81 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 25.13 | 47.14 |
| Bra039036.1-P | Field mustard | nucleus | 22.84 | 46.63 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 24.11 | 46.34 |
| Os01t0274800-01 | Rice | nucleus | 29.44 | 43.77 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 27.41 | 42.86 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 22.84 | 42.65 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 32.49 | 42.38 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 29.44 | 42.18 |
| Zm00001d040426_P001 | Maize | nucleus | 28.93 | 41.01 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 26.9 | 40.3 |
| GSMUA_Achr10P... | Banana | nucleus | 32.74 | 40.19 |
| Zm00001d008251_P002 | Maize | nucleus | 30.46 | 40.13 |
| AT5G39700.1 | Thale cress | nucleus | 19.29 | 40.0 |
| Zm00001d040423_P001 | Maize | nucleus | 30.2 | 39.93 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 26.4 | 39.69 |
| EES02758 | Sorghum | nucleus | 30.46 | 39.6 |
| GSMUA_Achr10P... | Banana | nucleus | 30.46 | 39.47 |
| Bra025652.1-P | Field mustard | nucleus | 25.89 | 39.38 |
| EES02759 | Sorghum | nucleus | 28.17 | 39.36 |
| CDY30264 | Canola | nucleus | 25.89 | 39.23 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 25.38 | 39.06 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 29.95 | 38.82 |
| CDY44415 | Canola | nucleus | 25.38 | 38.31 |
| TraesCS3B01G217100.1 | Wheat | nucleus | 29.95 | 37.7 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 32.74 | 37.28 |
| GSMUA_Achr11P... | Banana | nucleus | 25.89 | 37.09 |
| TraesCS3D01G191400.1 | Wheat | nucleus | 29.95 | 36.76 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 29.44 | 36.36 |
| TraesCS3A01G187800.1 | Wheat | nucleus | 29.95 | 36.31 |
| GSMUA_Achr10P... | Banana | nucleus | 23.86 | 36.15 |
| CDY20004 | Canola | nucleus | 26.14 | 35.89 |
| HORVU3Hr1G038700.2 | Barley | nucleus | 29.95 | 35.76 |
| Bra033078.1-P | Field mustard | nucleus | 25.63 | 35.31 |
| CDY67808 | Canola | nucleus | 14.21 | 35.22 |
| CDY66025 | Canola | nucleus | 25.63 | 35.07 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 26.4 | 34.44 |
| AT3G29020.2 | Thale cress | nucleus | 25.63 | 33.11 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 29.7 | 33.05 |
| CDY66170 | Canola | nucleus | 25.89 | 32.48 |
| CDX74436 | Canola | nucleus | 25.89 | 28.25 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 19.29 | 28.25 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 15.99 | 28.0 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 18.78 | 27.82 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 19.04 | 26.6 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 19.04 | 25.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.77 | 24.73 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 18.53 | 24.58 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 17.77 | 24.31 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 18.53 | 24.17 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 18.02 | 23.99 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 17.51 | 23.96 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 26.14 | 21.91 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 16.75 | 20.5 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 16.24 | 16.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P10490_001 | EnsemblPlants:GSMUA_Achr11T10490_001 | EnsemblPlantsGene:GSMUA_Achr11G10490_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF473 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TMHMM:TMhelix | UniParc:UPI0002955D23 | UniProt:M0RR29 | MapMan:15.5.2.1 | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G10490_001]
Coordinates
chr11:+:8300707..8303960
Molecular Weight (calculated)
44969.2 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.518
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFLLFFNHL SYKYSFLFFG FLLLLLLSRL HVDLFLHDNQ LIGGEWYERR VPSEEHEGIE ALNRRLGAEE ESERSNGRRV HEDKQPKSSG RGHWRPSEDA
101: KLKELVSQYG PHNWNLIAEK LEGRSGKSCR LRWFNQLDPR INRRAFSVEE DEKLLAFHRV YGNKWSLIAR FFPGRTDNAV KNQWHVIMAR KKREQCSRYM
201: RRKAFTTSPD HWTQALPQMM NMSSGHNAWS GDSSITSTRD ESTSTCTGLP LTPSACRFMP WLQIKSVSCA GLDEKLQTRR NGCNEKPGEP GTVFNNGKAP
301: MVELAMGSGH FAYSDASFEG SATDPAANHT NNAFLQAERD GGTNKISARF IDFLALFVHC ITSFADTDPT KYDLIFICSL SPFSVLHLHD CTCS
101: KLKELVSQYG PHNWNLIAEK LEGRSGKSCR LRWFNQLDPR INRRAFSVEE DEKLLAFHRV YGNKWSLIAR FFPGRTDNAV KNQWHVIMAR KKREQCSRYM
201: RRKAFTTSPD HWTQALPQMM NMSSGHNAWS GDSSITSTRD ESTSTCTGLP LTPSACRFMP WLQIKSVSCA GLDEKLQTRR NGCNEKPGEP GTVFNNGKAP
301: MVELAMGSGH FAYSDASFEG SATDPAANHT NNAFLQAERD GGTNKISARF IDFLALFVHC ITSFADTDPT KYDLIFICSL SPFSVLHLHD CTCS
001: MMCSRGHWRP AEDEKLRELV EQFGPHNWNA IAQKLSGRSG KSCRLRWFNQ LDPRINRNPF TEEEEERLLA SHRIHGNRWS VIARFFPGRT DNAVKNHWHV
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
101: IMARRGRERS KLRPRGLGHD GTVAATGMIG NYKDCDKERR LATTTAINFP YQFSHINHFQ VLKEFLTGKI GFRNSTTPIQ EGAIDQTKRP MEFYNFLQVN
201: TDSKIHELID NSRKDEEEDV DQNNRIPNEN CVPFFDFLSV GNSASQGLC
Arabidopsis Description
MYB52Transcription factor MYB52 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0C4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.