Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P16490_001 | Banana | nucleus | 43.17 | 47.02 |
| GSMUA_Achr6P15900_001 | Banana | nucleus | 59.02 | 39.27 |
| GSMUA_Achr9P29090_001 | Banana | nucleus | 44.26 | 38.57 |
| GSMUA_Achr10P... | Banana | nucleus | 63.93 | 38.49 |
| GSMUA_Achr9P17000_001 | Banana | nucleus | 63.93 | 38.49 |
| GSMUA_Achr5P27750_001 | Banana | nucleus | 52.46 | 38.1 |
| GSMUA_Achr3P07700_001 | Banana | nucleus | 42.08 | 37.56 |
| GSMUA_Achr9P04990_001 | Banana | nucleus | 61.2 | 37.09 |
| GSMUA_Achr3P09490_001 | Banana | nucleus | 62.84 | 36.05 |
| GSMUA_Achr10P... | Banana | nucleus | 61.2 | 34.89 |
| GSMUA_Achr9P15750_001 | Banana | nucleus | 39.89 | 34.6 |
| GSMUA_Achr6P32250_001 | Banana | nucleus | 65.03 | 34.39 |
| GSMUA_Achr9P08480_001 | Banana | nucleus | 45.9 | 32.81 |
| GSMUA_Achr11P... | Banana | nucleus | 47.54 | 31.64 |
| GSMUA_Achr10P... | Banana | nucleus | 44.81 | 31.54 |
| GSMUA_Achr6P17630_001 | Banana | nucleus | 44.26 | 30.8 |
| GSMUA_Achr3P18970_001 | Banana | nucleus | 42.62 | 29.77 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 46.45 | 28.15 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 51.37 | 26.55 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 30.05 | 24.44 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 50.27 | 23.35 |
| GSMUA_Achr4P12950_001 | Banana | nucleus | 31.69 | 21.8 |
| GSMUA_Achr4P20150_001 | Banana | nucleus | 31.15 | 21.19 |
| GSMUA_Achr1P26140_001 | Banana | nucleus | 31.15 | 20.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.6 | 19.79 |
| GSMUA_Achr3P13070_001 | Banana | nucleus | 31.15 | 19.66 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 50.27 | 19.57 |
| GSMUA_Achr1P09750_001 | Banana | nucleus | 31.69 | 19.53 |
| GSMUA_Achr9P22600_001 | Banana | nucleus | 30.6 | 19.44 |
| GSMUA_Achr3P28230_001 | Banana | nucleus | 30.05 | 19.1 |
| GSMUA_Achr4P09450_001 | Banana | nucleus | 31.15 | 18.87 |
| GSMUA_Achr8P25220_001 | Banana | nucleus | 30.05 | 18.58 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 30.6 | 17.39 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 30.6 | 14.11 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P25100_001 | EnsemblPlants:GSMUA_Achr11T25100_001 | EnsemblPlantsGene:GSMUA_Achr11G25100_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 | PFAM:PF13921 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002963958 | UniProt:M0RV90 | MapMan:15.5.2.1 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G25100_001]
Coordinates
chr11:+:24340132..24341564
Molecular Weight (calculated)
21400.4 Da
IEP (calculated)
9.134
GRAVY (calculated)
-0.863
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFAPVAPP FVHGLTGEHE NHGKVEEDDQ RQHKLCARGH WRPAEDAKLK ELVSQHGPQH WNLIAEKIAG RTGKSCRLRW FNQLDPRINK KAFSEEEEER
101: LFVAHRLYGN RWALIARIFP GRTDNAVKNH WHVTMARKQR EQCNDASSYI CTETTCRKKN HKRLHPSYDV LQPWHCSMLC SDL
101: LFVAHRLYGN RWALIARIFP GRTDNAVKNH WHVTMARKQR EQCNDASSYI CTETTCRKKN HKRLHPSYDV LQPWHCSMLC SDL
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.