Factsheet for GSMUA_Achr7P18390_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P16490_001	Banana	nucleus	19.36	54.17
GSMUA_Achr11P...	Banana	nucleus	19.57	50.27
GSMUA_Achr3P07700_001	Banana	nucleus	18.51	42.44
GSMUA_Achr6P02580_001	Banana	nucleus	31.91	42.37
GSMUA_Achr9P29090_001	Banana	nucleus	18.51	41.43
GSMUA_Achr6P17630_001	Banana	nucleus	22.77	40.68
GSMUA_Achr9P15750_001	Banana	nucleus	18.09	40.28
GSMUA_Achr5P27750_001	Banana	nucleus	21.28	39.68
GSMUA_Achr9P08480_001	Banana	nucleus	21.49	39.45
GSMUA_Achr11P...	Banana	nucleus	22.98	39.27
GSMUA_Achr5P23290_001	Banana	nucleus	25.11	39.07
GSMUA_Achr10P...	Banana	nucleus	21.06	38.08
GSMUA_Achr6P15900_001	Banana	nucleus	21.91	37.45
CDY67868	Canola	nucleus	23.62	37.25
Bra003995.1-P	Field mustard	nucleus	23.4	37.04
CDY07345	Canola	nucleus	23.4	36.91
GSMUA_Achr3P18970_001	Banana	nucleus	20.43	36.64
GSMUA_Achr9P04990_001	Banana	nucleus	22.77	35.43
CDY40941	Canola	nucleus	24.04	35.31
CDX95921	Canola	nucleus	24.04	35.31
Bra004394.1-P	Field mustard	nucleus	24.04	35.31
CDY50737	Canola	nucleus	25.53	34.88
GSMUA_Achr10P...	Banana	nucleus	22.55	34.87
GSMUA_Achr9P17000_001	Banana	nucleus	22.34	34.54
GSMUA_Achr10P...	Banana	nucleus	23.4	34.27
GSMUA_Achr3P09490_001	Banana	nucleus	23.19	34.17
CDY46444	Canola	nucleus	24.89	33.14
Bra016285.1-P	Field mustard	nucleus	24.89	33.14
VIT_14s0108g01010.t01	Wine grape	nucleus	33.4	32.98
AT1G26780.2	Thale cress	nucleus	25.11	32.87
CDY44993	Canola	nucleus	24.68	32.86
AT1G69560.2	Thale cress	nucleus	23.62	32.08
VIT_01s0026g02600.t01	Wine grape	nucleus	31.06	31.95
KRH50566	Soybean	nucleus	29.57	31.88
Solyc05g007870.1.1	Tomato	nucleus	27.45	30.94
PGSC0003DMT400047415	Potato	nucleus	27.87	30.54
GSMUA_Achr6P32250_001	Banana	nucleus	22.34	30.35
GSMUA_Achr6P33470_001	Banana	nucleus	14.47	30.22
KRG89586	Soybean	nucleus	30.43	29.42
KRH74887	Soybean	plastid	28.94	29.25
KRH70748	Soybean	nucleus	28.3	28.48
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	21.91	26.14
GSMUA_Achr4P12950_001	Banana	nucleus	14.47	25.56
GSMUA_Achr4P20150_001	Banana	nucleus	14.26	24.91
GSMUA_Achr1P26140_001	Banana	nucleus	14.47	24.11
GSMUA_Achr9P22600_001	Banana	nucleus	14.26	23.26
GSMUA_Achr8P25220_001	Banana	nucleus	14.47	22.97
GSMUA_Achr4P09450_001	Banana	nucleus	14.68	22.85
GSMUA_Achr3P13070_001	Banana	nucleus	14.04	22.76
GSMUA_AchrUn_...	Banana	nucleus	13.62	22.61
GSMUA_Achr3P28230_001	Banana	nucleus	13.83	22.57
GSMUA_Achr1P09750_001	Banana	nucleus	14.26	22.56
GSMUA_Achr9P03720_001	Banana	nucleus	14.47	21.12
GSMUA_Achr5P28780_001	Banana	nucleus	15.11	17.88

Protein Annotations

EnsemblPlants:GSMUA_Achr7P18390_001	EnsemblPlants:GSMUA_Achr7T18390_001	EnsemblPlantsGene:GSMUA_Achr7G18390_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF473	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002952A2A	UniProt:M0TIM6	MapMan:15.5.2.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G18390_001]

Coordinates

chr7:-:21181466..21183027

Molecular Weight (calculated)

51956.4 Da

IEP (calculated)

9.470

GRAVY (calculated)

-0.507

Length

470 amino acids

Sequence
(BLAST)

001: MASRCRADSS CSSSSKGVVA ETASLSINPT SSAESHQYCS KGSRTTCWTF PFTDSCLSLQ ENRREKSEVA HPKCCYGENL VAEGIEDDSP DDENVVGDPS
101: GGSGAADSGQ SKVCARGHWR PAEDSKLKEM VALYGPQNWN LIAEKLEGRS GKSCRLRWFN QLDPRINRRP FTEEEEEKLM TAHRFYGNKW AMIARLFPGR
201: TDNAVKNHWH VVMARKYREQ SAAYRRRKLG QEVLHHHRLD EAAAAKATAA PRTAYGSTSG SFPSFPFLAA VDASAGAHHM PHYSGDSLSN CSGFSAEGTP
301: FDFFSGTCRL SSPPPLLPCA SATACSQSSS TLNTTHLLLH VWVSPLNFLK MGVEITSRSS KKLSRERGQN MRRLSLNLKE DLMMASLPLS LVVFGSEHLQ
401: ITRFTRRKAS TATCHRTCRL LSPSWALTII LRSARRCSDR ATYPTSLPLR HHLKTTARAA TLMPQSHQLS

Best Arabidopsis Sequence Match ( AT1G26780.1 )
(BLAST)

001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGSL

Arabidopsis Description

MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.