CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74887	Soybean	plastid	88.44	88.82
KRH50566	Soybean	nucleus	45.4	48.62
VIT_01s0026g02600.t01	Wine grape	nucleus	47.11	48.14
KRG89586	Soybean	nucleus	48.82	46.91
Os08t0435700-00	Rice	nucleus	25.05	45.35
KRH09502	Soybean	nucleus	22.27	44.44
KRH38975	Soybean	nucleus	22.27	43.88
GSMUA_Achr6P02580_001	Banana	nucleus	33.19	43.79
Bra003995.1-P	Field mustard	nucleus	27.62	43.43
CDY07345	Canola	nucleus	27.62	43.29
CDY67868	Canola	nucleus	27.41	42.95
GSMUA_Achr5P23290_001	Banana	nucleus	27.62	42.72
KRG94450	Soybean	nucleus	13.92	41.14
AT1G69560.2	Thale cress	nucleus	30.19	40.75
Bra004394.1-P	Field mustard	nucleus	27.84	40.62
CDX95921	Canola	nucleus	27.84	40.62
CDY40941	Canola	nucleus	27.62	40.31
CDY46444	Canola	nucleus	29.98	39.66
Bra016285.1-P	Field mustard	nucleus	29.98	39.66
CDY50737	Canola	nucleus	28.91	39.24
CDY44993	Canola	nucleus	29.55	39.09
AT1G26780.2	Thale cress	nucleus	29.34	38.16
TraesCS3B01G473600.1	Wheat	nucleus	28.69	37.85
TraesCS3A01G439500.1	Wheat	nucleus	28.69	37.85
KRH37830	Soybean	nucleus	11.35	37.32
TraesCS3D01G432300.2	Wheat	nucleus	28.05	37.01
Solyc05g007870.1.1	Tomato	nucleus	32.55	36.45
KRH53362	Soybean	nucleus	25.7	36.25
PGSC0003DMT400047415	Potato	nucleus	33.19	36.13
KRG94926	Soybean	nucleus	29.12	35.98
KRH15916	Soybean	nucleus	18.2	35.12
Zm00001d032194_P002	Maize	nucleus, plastid	28.69	35.08
KRH64569	Soybean	nucleus	25.27	34.91
KRH64970	Soybean	nucleus	29.76	34.32
KRH61246	Soybean	nucleus	14.35	31.9
HORVU3Hr1G096010.6	Barley	nucleus	25.7	31.41
KRH51945	Soybean	nucleus	14.35	30.32
KRH15420	Soybean	nucleus	16.7	28.57
KRH05621	Soybean	nucleus	16.27	28.36
GSMUA_Achr7P18390_001	Banana	nucleus, plastid	28.48	28.3
KRH61351	Soybean	nucleus	15.42	27.8
KRH14928	Soybean	nucleus	13.49	26.47
KRH05732	Soybean	nucleus	13.92	26.32
KRH57983	Soybean	nucleus	15.85	25.08
KRH28419	Soybean	nucleus	15.85	24.92
KRH73284	Soybean	nucleus	13.06	24.7
KRH77058	Soybean	nucleus	15.63	23.93
KRH75766	Soybean	nucleus	16.27	21.71
KRG88785	Soybean	nucleus	16.27	21.59
OQU80507	Sorghum	nucleus	29.76	20.35
KRH15016	Soybean	nucleus	16.27	19.34
KRH73115	Soybean	nucleus	15.42	18.05
Os08t0435725-00	Rice	cytosol	2.78	13.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100789305	MapMan:15.5.2.1	EMBL:ACUP02000792	EnsemblPlantsGene:GLYMA_02G108800	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7K7M3	EnsemblPlants:KRH70748	ProteinID:KRH70748
ProteinID:KRH70748.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF473
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002337885	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:10408234..10410704

Molecular Weight (calculated)

52034.1 Da

IEP (calculated)

7.170

GRAVY (calculated)

-0.781

Length

467 amino acids

Sequence
(BLAST)

001: MASSKCCMIS PQQNQNAPTC YPSPMGMVYA DMMGSLSLAT VSNNASSSQE SNGYSYGYAS GVENARSTRW SFPFTREFLS SNFEDCSDVV VGAGDSNNNI
101: NEKTNHNNGK FSEEESNPNE NNPAGGKEVD SGHSKLCARG HWRPAEDSKL KELVALHGPQ NWNLIAEKLE GRSGKSCRLR WFNQLDPRIN RRAFSEEEEE
201: RLMQAHRIYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY REQSSAYRRR RMSQPVYRRV DQNPTFVCSS RDNNASTTEP EPESSPSYYP NLNDRGVALT
301: NNMASFPSLH GVAAGAGGVV EFGSNVSPLN MTRGREAVSN TTHVGLCAQA QQQAPFDFFS GGGSHDMVLE SMSQMRSRER TNESYNHHCQ LSGFYPHHPQ
401: QYLMAMQQQL DNNNFYSFLN SSSSASTTRT REPSSPCVAE IRDKVVNSDP PDGVPPPFFD FFGVGAT

Best Arabidopsis Sequence Match ( AT1G69560.1 )
(BLAST)

001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.