Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88785 | Soybean | nucleus | 94.29 | 93.75 |
| VIT_08s0007g01540.t01 | Wine grape | nucleus | 66.29 | 56.59 |
| PGSC0003DMT400052395 | Potato | nucleus | 59.43 | 54.88 |
| Solyc09g011780.2.1 | Tomato | nucleus | 58.86 | 54.21 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 49.14 | 53.42 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 30.57 | 47.56 |
| KRH37830 | Soybean | nucleus | 19.14 | 47.18 |
| KRH15016 | Soybean | nucleus | 50.57 | 45.04 |
| KRH61246 | Soybean | nucleus | 24.86 | 41.43 |
| KRH51945 | Soybean | nucleus | 25.71 | 40.72 |
| KRH73115 | Soybean | nucleus | 44.86 | 39.35 |
| KRH14928 | Soybean | nucleus | 26.29 | 38.66 |
| KRH61351 | Soybean | nucleus | 28.0 | 37.84 |
| KRH28419 | Soybean | nucleus | 31.71 | 37.37 |
| KRH73284 | Soybean | nucleus | 26.29 | 37.25 |
| OQU87862 | Sorghum | nucleus | 42.29 | 37.09 |
| Zm00001d012379_P001 | Maize | nucleus | 42.0 | 36.66 |
| Os01t0850400-01 | Rice | nucleus | 42.57 | 36.08 |
| KRH77058 | Soybean | nucleus | 31.43 | 36.07 |
| KRH05621 | Soybean | nucleus | 27.14 | 35.45 |
| KRH57983 | Soybean | nucleus | 29.14 | 34.58 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 38.29 | 33.75 |
| KRH15420 | Soybean | nucleus | 26.0 | 33.33 |
| KRH05732 | Soybean | nucleus | 22.29 | 31.58 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 41.14 | 31.17 |
| HORVU3Hr1G085570.1 | Barley | plastid | 40.29 | 30.59 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 40.86 | 30.56 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 40.57 | 30.28 |
| KRG94450 | Soybean | nucleus | 13.14 | 29.11 |
| KRH09502 | Soybean | nucleus | 19.14 | 28.63 |
| KRH38975 | Soybean | nucleus | 19.14 | 28.27 |
| KRH53362 | Soybean | nucleus | 23.43 | 24.77 |
| KRH15916 | Soybean | nucleus | 16.57 | 23.97 |
| KRH64569 | Soybean | nucleus | 23.14 | 23.96 |
| KRG94926 | Soybean | nucleus | 21.71 | 20.11 |
| KRH64970 | Soybean | nucleus | 21.71 | 18.77 |
| KRH50566 | Soybean | nucleus | 21.71 | 17.43 |
| KRH74887 | Soybean | plastid | 22.57 | 16.99 |
| KRH70748 | Soybean | nucleus | 21.71 | 16.27 |
| KRG89586 | Soybean | nucleus | 21.71 | 15.64 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100811740 | MapMan:15.5.2.1 | EMBL:ACUP02000484 | EnsemblPlantsGene:GLYMA_01G107500 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1J738 | InterPro:IPR017930 | EnsemblPlants:KRH75766 | ProteinID:KRH75766 |
| ProteinID:KRH75766.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00023373DB | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:+:36692682..36703654
Molecular Weight (calculated)
37851.5 Da
IEP (calculated)
6.137
GRAVY (calculated)
-0.485
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEETAAAA DGSFDEGLLG LDDGGGGGRD RVKGPWSPEE DAILSRLVGK FGARNWSLIA RGISGRSGKS CRLRWCNQLD PAVKRKPFTD EEDRMIVAAH
101: AIHGNKWAAI ARLLPGRTDN AIKNHWNSTL RRRGVGHDTI KLESVSFMED VSLEKAKASS EDTLSCGDVS LKSSEGRDVS SMEIMDDKSD DKAQTEGQIH
201: HEVKDLPTLF RPVARVSAFN VYHSFDGTQP STSIKRPVPM QGAVLQSSKP DMEFCRMLEG ICGDQSVPHQ CGHGCCAAPD GRKSESSLLG PEFVEFSEPP
301: SFPNFELAAI ATDISNLAWL KSGLESSSAK MMGNTSGRVV SNGSQVHIGH
101: AIHGNKWAAI ARLLPGRTDN AIKNHWNSTL RRRGVGHDTI KLESVSFMED VSLEKAKASS EDTLSCGDVS LKSSEGRDVS SMEIMDDKSD DKAQTEGQIH
201: HEVKDLPTLF RPVARVSAFN VYHSFDGTQP STSIKRPVPM QGAVLQSSKP DMEFCRMLEG ICGDQSVPHQ CGHGCCAAPD GRKSESSLLG PEFVEFSEPP
301: SFPNFELAAI ATDISNLAWL KSGLESSSAK MMGNTSGRVV SNGSQVHIGH
001: MEAEIVRRSE VTGLRREVEE SSIGRGDCDG DGGDVGEDAA GFVGTSGRGR RDRVKGPWSK EEDDVLSELV KRLGARNWSF IARSIPGRSG KSCRLRWCNQ
101: LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT
201: PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG
301: CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST
101: LNPNLIRNSF TEVEDQAIIA AHAIHGNKWA VIAKLLPGRT DNAIKNHWNS ALRRRFIDFE KAKNIGTGSL VVDDSGFDRT TTVASSEETL SSGGGCHVTT
201: PIVSPEGKEA TTSMEMSEEQ CVEKTNGEGI SRQDDKDPPT LFRPVPRLSS FNACNHMEGS PSPHIQDQNQ LQSSKQDAAM LRLLEGAYSE RFVPQTCGGG
301: CCSNNPDGSF QQESLLGPEF VDYLDSPTFP SSELAAIATE IGSLAWLRSG LESSSVRVME DAVGRLRPQG SRGHRDHYLV SEQGTNITNV LST
Arabidopsis Description
MYB1Transcription factor MYB1 [Source:UniProtKB/Swiss-Prot;Acc:Q42575]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.