Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87862 | Sorghum | nucleus | 85.29 | 85.71 |
| Os01t0850400-01 | Rice | nucleus | 60.6 | 58.84 |
| TraesCS3A01G365200.1 | Wheat | nucleus | 59.6 | 51.73 |
| TraesCS3B01G397100.1 | Wheat | nucleus | 59.6 | 51.07 |
| TraesCS3D01G358400.1 | Wheat | nucleus | 59.6 | 50.96 |
| HORVU3Hr1G085570.1 | Barley | plastid | 56.11 | 48.81 |
| GSMUA_Achr6P33470_001 | Banana | nucleus | 27.18 | 48.44 |
| GSMUA_Achr9P03720_001 | Banana | nucleus | 36.16 | 45.03 |
| KRH75766 | Soybean | nucleus | 36.66 | 42.0 |
| KRG88785 | Soybean | nucleus | 36.41 | 41.48 |
| Solyc09g011780.2.1 | Tomato | nucleus | 37.66 | 39.74 |
| VIT_13s0019g03200.t01 | Wine grape | nucleus | 37.41 | 39.68 |
| PGSC0003DMT400052395 | Potato | nucleus | 37.16 | 39.31 |
| PGSC0003DMT400069921 | Potato | nucleus | 35.91 | 38.5 |
| Solyc05g052850.2.1 | Tomato | nucleus | 35.91 | 38.5 |
| VIT_08s0007g01540.t01 | Wine grape | nucleus | 38.4 | 37.56 |
| CDX72208 | Canola | nucleus | 32.92 | 35.87 |
| CDY27271 | Canola | nucleus | 33.17 | 35.66 |
| Bra007186.1-P | Field mustard | nucleus | 32.92 | 35.58 |
| Zm00001d004681_P001 | Maize | nucleus | 16.71 | 35.08 |
| KRH15016 | Soybean | nucleus | 34.16 | 34.86 |
| AT3G55730.1 | Thale cress | nucleus | 34.16 | 34.34 |
| CDY20494 | Canola | nucleus | 30.17 | 32.88 |
| KRH73115 | Soybean | nucleus | 31.67 | 31.83 |
| Zm00001d005300_P001 | Maize | nucleus | 22.44 | 31.58 |
| GSMUA_Achr5P28780_001 | Banana | nucleus | 30.67 | 30.98 |
| Bra005006.1-P | Field mustard | nucleus | 30.67 | 30.9 |
| Zm00001d036768_P001 | Maize | nucleus | 23.69 | 30.84 |
| Zm00001d046632_P001 | Maize | nucleus | 23.19 | 30.59 |
| Zm00001d015614_P001 | Maize | nucleus | 23.19 | 30.59 |
| CDX74825 | Canola | nucleus | 29.93 | 29.93 |
| Zm00001d041935_P001 | Maize | nucleus | 19.45 | 29.55 |
| AT2G39880.1 | Thale cress | nucleus | 26.93 | 29.43 |
| Zm00001d041818_P001 | Maize | nucleus | 16.21 | 28.89 |
| Zm00001d019712_P001 | Maize | nucleus | 22.94 | 26.67 |
| Zm00001d040426_P001 | Maize | nucleus | 18.2 | 26.26 |
| Zm00001d037999_P001 | Maize | nucleus | 18.7 | 25.77 |
| Zm00001d013399_P001 | Maize | nucleus | 15.21 | 25.42 |
| Zm00001d033815_P001 | Maize | nucleus | 15.71 | 25.4 |
| Zm00001d008251_P002 | Maize | nucleus | 18.45 | 24.75 |
| Zm00001d049079_P001 | Maize | nucleus | 16.96 | 24.55 |
| Zm00001d040423_P001 | Maize | nucleus | 17.71 | 23.83 |
| Zm00001d037994_P001 | Maize | nucleus | 21.45 | 23.31 |
| Zm00001d037998_P001 | Maize | nucleus | 18.45 | 23.05 |
| Zm00001d040428_P001 | Maize | nucleus | 13.72 | 19.43 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 17.71 | 18.59 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100273738 | MapMan:15.5.2.1 | ProteinID:AQK99399.1 | UniProt:B4FX89 | EMBL:BT041727 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EMBL:HQ858763 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF524 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001A595DB | EnsemblPlantsGene:Zm00001d012379 | EnsemblPlants:Zm00001d012379_P001 |
| EnsemblPlants:Zm00001d012379_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 36myb domain protein 109
Coordinates
chr8:+:173237609..173239733
Molecular Weight (calculated)
43376.5 Da
IEP (calculated)
5.411
GRAVY (calculated)
-0.494
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAETAVSP TTTPQPQLQS DPNAAADAAS SNSLWVADET QTLTEVLLQP QPNHLSPPPS GEGDDGITAS GAPVGGDAAA SASAAAAANA TIEERVRGPW
101: SPEEDAVLSN LVEKFGARNW TLIARGIPGR SGKSCRLRWC NQLDPQVKRK PFTEEEDRII MAAHAVHGNK WASIAKLLDG RTDNAIKNHW NSTLRRRYCN
201: DGQCKHGGSV ERSIPKVSRE VSEEPWPLND LNSFTAMDVK DDPVQTAPDT SPRARHITDH CSITQVVDPP YLSRPAAKIG AFRPYYLGHT EPTQQEMPGA
301: VVMFDSTHKV STPESEVFKF VDPICFAAEV PDKCGYGCCG AHEQHRKNSL LGPEFSEFEG HPPVLNISFA SLVSEISSIA WMRSGMQSSD SSNLMQSIPP
401: T
101: SPEEDAVLSN LVEKFGARNW TLIARGIPGR SGKSCRLRWC NQLDPQVKRK PFTEEEDRII MAAHAVHGNK WASIAKLLDG RTDNAIKNHW NSTLRRRYCN
201: DGQCKHGGSV ERSIPKVSRE VSEEPWPLND LNSFTAMDVK DDPVQTAPDT SPRARHITDH CSITQVVDPP YLSRPAAKIG AFRPYYLGHT EPTQQEMPGA
301: VVMFDSTHKV STPESEVFKF VDPICFAAEV PDKCGYGCCG AHEQHRKNSL LGPEFSEFEG HPPVLNISFA SLVSEISSIA WMRSGMQSSD SSNLMQSIPP
401: T
001: MEGETHQSEP LPLASGDSDE GISAAIEAEL AELAAGDSSG GGGCGGGGGG IRSKVKGPWS TEEDAVLTKL VRKLGPRNWS LIARGIPGRS GKSCRLRWCN
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
101: QLDPCLKRKP FSDEEDRMII SAHAVHGNKW AVIAKLLTGR TDNAIKNHWN STLRRKYADL WNNGQWMANS VTTASVKNEN VDETTNPPSS KQQLPQGDIN
201: SSPPKPPQVS DVVMEEAANE PQEPQEQQEQ APPVVSNVPT ENNVFRPVAR VGAFSIYNPT SQKNGYRDYN IVPCEGPLIQ AAKPDSLAGK FLQSLCDEPQ
301: IPSKCGHGCS TLPAETKFSR NSVLGPEFVD YEEPSAVFNQ ELISIATDLN NIAWIKSGLD NAVVREAEQS LKMDNYNYND PRIKFTGMMP RQDFFCARS
Arabidopsis Description
MYB109MYB transcription factor-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LDW5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.