Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037998_P001 | Maize | nucleus | 87.29 | 79.13 |
| CDX83109 | Canola | nucleus | 22.34 | 40.12 |
| EES18041 | Sorghum | nucleus | 35.74 | 29.13 |
| TraesCS1D01G225200.1 | Wheat | nucleus | 28.52 | 27.3 |
| TraesCS1B01G236900.1 | Wheat | nucleus | 28.18 | 27.06 |
| Zm00001d041935_P001 | Maize | nucleus | 24.4 | 26.89 |
| Zm00001d015614_P001 | Maize | nucleus | 27.49 | 26.32 |
| Zm00001d046632_P001 | Maize | nucleus | 27.49 | 26.32 |
| Zm00001d005300_P001 | Maize | nucleus | 25.77 | 26.32 |
| Zm00001d004681_P001 | Maize | nucleus | 16.84 | 25.65 |
| Zm00001d036768_P001 | Maize | nucleus | 26.8 | 25.32 |
| Zm00001d037994_P001 | Maize | nucleus | 31.96 | 25.2 |
| TraesCS1A01G223600.1 | Wheat | nucleus | 28.52 | 25.08 |
| HORVU1Hr1G060030.1 | Barley | nucleus | 28.52 | 24.85 |
| Zm00001d019712_P001 | Maize | nucleus | 26.12 | 22.03 |
| Zm00001d041818_P001 | Maize | nucleus | 16.15 | 20.89 |
| CDY43567 | Canola | nucleus | 15.46 | 20.74 |
| Zm00001d013399_P001 | Maize | nucleus | 16.49 | 20.0 |
| Zm00001d033815_P001 | Maize | nucleus | 16.84 | 19.76 |
| Zm00001d040426_P001 | Maize | nucleus | 18.21 | 19.06 |
| Zm00001d008251_P002 | Maize | nucleus | 19.59 | 19.06 |
| Zm00001d012379_P001 | Maize | nucleus | 25.77 | 18.7 |
| Zm00001d040423_P001 | Maize | nucleus | 18.9 | 18.46 |
| Zm00001d049079_P001 | Maize | nucleus | 17.18 | 18.05 |
| Zm00001d040428_P001 | Maize | nucleus | 17.18 | 17.67 |
| Os05t0350900-01 | Rice | nucleus | 12.37 | 17.06 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 18.56 | 14.14 |
| CDX83108 | Canola | cytosol | 0.69 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103630259 | MapMan:15.5.2.1 | UniProt:A0A1D6M2P1 | ProteinID:AQK85450.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF907 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000221ADC1 | EnsemblPlantsGene:Zm00001d037999 | EnsemblPlants:Zm00001d037999_P001 | EnsemblPlants:Zm00001d037999_T001 | SEG:seg |
Description
MYB-transcription factor 71Putative MYB DNA-binding domain superfamily protein
Coordinates
chr6:-:144762649..144763524
Molecular Weight (calculated)
30843.2 Da
IEP (calculated)
7.168
GRAVY (calculated)
-0.442
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGDGCGVS VAASGSRRVN RPWTPEEDEL LRRAVARHGP RKWPELSADI PGRCGKSCRR RWVEHLSPGL EHRAFTPEED AVIVAAQAKH GNKWATIARM
101: LPGRTDNSIK NRWNFALQQQ CRAAAASANT AGCALPLRPA TTAPVPLPHL LDLNKKSTAA EASIPFHRLE PEDDEGMGEG DDGSSEVSPP APLTLTLSLS
201: SGVHGTLASQ STLASAATLA SQSTFASAAT TAGSAMTMRT NLEQNPWLVP ALRLIVSDEV QRKMQEMRQV TAPASRSSAD AADGSAANGQ D
101: LPGRTDNSIK NRWNFALQQQ CRAAAASANT AGCALPLRPA TTAPVPLPHL LDLNKKSTAA EASIPFHRLE PEDDEGMGEG DDGSSEVSPP APLTLTLSLS
201: SGVHGTLASQ STLASAATLA SQSTFASAAT TAGSAMTMRT NLEQNPWLVP ALRLIVSDEV QRKMQEMRQV TAPASRSSAD AADGSAANGQ D
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.