Factsheet for Zm00001d015614_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G035470.1	Barley	nucleus	83.22	85.47
EES04668	Sorghum	nucleus	91.78	85.32
TraesCS6A01G173800.1	Wheat	nucleus	82.57	84.23
TraesCS6D01G162900.1	Wheat	nucleus	82.24	84.18
TraesCS6B01G201700.1	Wheat	nucleus	80.59	83.62
Os02t0187700-00	Rice	nucleus	79.93	80.73
Zm00001d046632_P001	Maize	nucleus	65.79	65.79
Zm00001d036768_P001	Maize	nucleus	65.46	64.61
Zm00001d005300_P001	Maize	nucleus	46.71	49.82
CDX83109	Canola	nucleus	25.99	48.77
CDY43567	Canola	nucleus	31.91	44.7
Zm00001d019712_P001	Maize	nucleus	49.01	43.19
Zm00001d041935_P001	Maize	nucleus	33.22	38.26
Zm00001d004681_P001	Maize	nucleus	20.39	32.46
Zm00001d041818_P001	Maize	nucleus	22.7	30.67
Zm00001d037994_P001	Maize	nucleus	34.54	28.46
Zm00001d033815_P001	Maize	nucleus	23.03	28.23
Zm00001d013399_P001	Maize	nucleus	22.04	27.92
Zm00001d037999_P001	Maize	nucleus	26.32	27.49
Zm00001d040426_P001	Maize	nucleus	24.01	26.26
Zm00001d037998_P001	Maize	nucleus	27.3	25.86
Zm00001d040423_P001	Maize	nucleus	25.33	25.84
Zm00001d008251_P002	Maize	nucleus	24.67	25.08
Zm00001d049079_P001	Maize	nucleus	22.7	24.91
Zm00001d012379_P001	Maize	nucleus	30.59	23.19
Zm00001d040428_P001	Maize	nucleus	21.05	22.61
Zm00001d032194_P002	Maize	nucleus, plastid	22.7	18.06
CDX83108	Canola	cytosol	1.97	15.38

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100281240	MapMan:15.5.2.1	ProteinID:AQK69210.1	UniProt:B4FMQ3	EMBL:BT038391
EMBL:EU956045	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	EMBL:HQ858701
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF926	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00017B6D52	EnsemblPlantsGene:Zm00001d015614
EnsemblPlants:Zm00001d015614_P001	EnsemblPlants:Zm00001d015614_T001	SEG:seg	:	:	:

Description

MYB-transcription factor 50Transcription factor MYB44

Coordinates

chr5:+:101152012..101152926

Molecular Weight (calculated)

32166.8 Da

IEP (calculated)

8.712

GRAVY (calculated)

-0.478

Length

304 amino acids

Sequence
(BLAST)

001: MGVESECDRI KGPWSPEEDE ALRRLVERHG ARNWTAIGRG IPGRSGKSCR LRWCNQLSPQ VERRPFTPEE DAAILAAHAR LGNRWAAIAR LLPGRTDNAV
101: KNHWNSSLKR KLATATATSS GSDAERACKR ASPGPGSPTA SDRSDLSHGC GAAQVFRPVP RAGGFDAISA ADVRPPPPPA VADEDPLTSL SLSLPGLDQS
201: PSGFHHDSAR SHFQELSPSS SPSPQSTPPA FPPQAAPSQS SYAFSGELVA AMQEMIRAEV RKYMSGAGLR AGCGPGAVGE VCMPQLVEGV MRAAAERVGV
301: VTRP

Best Arabidopsis Sequence Match ( AT3G50060.1 )
(BLAST)

001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E

Arabidopsis Description

MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.