Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0435700-00 | Rice | nucleus | 51.83 | 76.74 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 62.04 | 66.95 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 61.52 | 66.38 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 61.52 | 66.38 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 57.33 | 57.33 |
| OQU80507 | Sorghum | nucleus | 87.43 | 48.9 |
| Zm00001d004681_P001 | Maize | nucleus | 24.35 | 48.69 |
| Zm00001d040423_P001 | Maize | nucleus | 33.77 | 43.29 |
| Zm00001d008251_P002 | Maize | nucleus | 33.25 | 42.47 |
| Zm00001d033815_P001 | Maize | nucleus | 27.49 | 42.34 |
| Zm00001d013399_P001 | Maize | nucleus | 26.44 | 42.08 |
| Zm00001d041818_P001 | Maize | nucleus | 24.08 | 40.89 |
| GSMUA_Achr11P... | Banana | nucleus | 29.32 | 40.73 |
| Zm00001d040426_P001 | Maize | nucleus | 29.58 | 40.65 |
| CDY67868 | Canola | nucleus | 29.84 | 38.26 |
| Bra003995.1-P | Field mustard | nucleus | 29.58 | 38.05 |
| CDY07345 | Canola | nucleus | 29.58 | 37.92 |
| Zm00001d049079_P001 | Maize | nucleus | 26.96 | 37.18 |
| Os08t0435725-00 | Rice | cytosol | 9.42 | 36.0 |
| CDY50737 | Canola | nucleus | 31.68 | 35.17 |
| CDY40941 | Canola | nucleus | 29.32 | 35.0 |
| Bra004394.1-P | Field mustard | nucleus | 29.06 | 34.69 |
| CDX95921 | Canola | nucleus | 29.06 | 34.69 |
| AT1G26780.2 | Thale cress | nucleus | 32.46 | 34.54 |
| CDY46444 | Canola | nucleus | 31.68 | 34.28 |
| CDY44993 | Canola | nucleus | 31.68 | 34.28 |
| Bra016285.1-P | Field mustard | nucleus | 31.68 | 34.28 |
| Zm00001d040428_P001 | Maize | nucleus | 25.13 | 33.92 |
| AT1G69560.2 | Thale cress | nucleus | 30.63 | 33.81 |
| VIT_14s0108g01010.t01 | Wine grape | nucleus | 41.1 | 32.98 |
| Solyc05g007870.1.1 | Tomato | nucleus | 35.6 | 32.61 |
| KRH50566 | Soybean | nucleus | 36.39 | 31.88 |
| PGSC0003DMT400047415 | Potato | nucleus | 35.6 | 31.7 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 37.7 | 31.51 |
| KRH74887 | Soybean | plastid | 35.86 | 29.46 |
| KRG89586 | Soybean | nucleus | 36.91 | 29.01 |
| KRH70748 | Soybean | nucleus | 35.08 | 28.69 |
| Zm00001d041935_P001 | Maize | nucleus | 17.28 | 25.0 |
| Zm00001d005300_P001 | Maize | nucleus | 18.06 | 24.21 |
| Zm00001d015614_P001 | Maize | nucleus | 18.06 | 22.7 |
| Zm00001d046632_P001 | Maize | nucleus | 17.8 | 22.37 |
| Zm00001d036768_P001 | Maize | nucleus | 17.54 | 21.75 |
| Zm00001d019712_P001 | Maize | nucleus | 19.63 | 21.74 |
| Zm00001d037999_P001 | Maize | nucleus | 14.14 | 18.56 |
| Zm00001d012379_P001 | Maize | nucleus | 18.59 | 17.71 |
| Zm00001d037994_P001 | Maize | nucleus | 17.02 | 17.62 |
| Zm00001d037998_P001 | Maize | nucleus | 14.14 | 16.82 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1D6KP30 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | ProteinID:ONM04562.1 | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000220EECC | EnsemblPlantsGene:Zm00001d032194 | EnsemblPlants:Zm00001d032194_P002 |
| EnsemblPlants:Zm00001d032194_T002 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 78myb domain protein 105
Coordinates
chr1:+:216643374..216646707
Molecular Weight (calculated)
40323.2 Da
IEP (calculated)
8.950
GRAVY (calculated)
-0.354
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCSSPAPTW LLRVSPAAAA ADQAAASSSC SSKGGGRVLT AGTTTMDTAA TAAAGGNAAD LQESSSSGQS RLAARGHWRP AEDAKLRELV ALYGPQNWNL
101: IAEKLDGRSG KSCRLRWFNQ LDPRISKRPF SDEEEERLMA AHRFYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS TAYRRRKLNQ AVQRKLEAAS
201: AAVAMPPGAG AGDVAVGQHH HLLAAAAAAH AHDAAYSFAA DPYGFGIRHQ YCTFPFPPGA ASAEDPPPPT QIHPFCLFPG PSSAAAHADS RRLPWPPSSD
301: APGVARYGEP HQLLQLPVQS GWIDGVGVAA AGHHEPPFVL GNNGGAAAFE GTTRQQGSGA HFEAAAAPPP PAFIDFLGVG AT
101: IAEKLDGRSG KSCRLRWFNQ LDPRISKRPF SDEEEERLMA AHRFYGNKWA MIARLFPGRT DNAVKNHWHV IMARKYREQS TAYRRRKLNQ AVQRKLEAAS
201: AAVAMPPGAG AGDVAVGQHH HLLAAAAAAH AHDAAYSFAA DPYGFGIRHQ YCTFPFPPGA ASAEDPPPPT QIHPFCLFPG PSSAAAHADS RRLPWPPSSD
301: APGVARYGEP HQLLQLPVQS GWIDGVGVAA AGHHEPPFVL GNNGGAAAFE GTTRQQGSGA HFEAAAAPPP PAFIDFLGVG AT
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.