Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g007870.1.1 | Tomato | nucleus | 92.07 | 94.72 |
| Os08t0435700-00 | Rice | nucleus | 27.97 | 46.51 |
| GSMUA_Achr11P... | Banana | nucleus | 27.74 | 43.27 |
| PGSC0003DMT400079714 | Potato | nucleus | 24.01 | 42.21 |
| CDY67868 | Canola | nucleus | 29.14 | 41.95 |
| Bra003995.1-P | Field mustard | nucleus | 28.9 | 41.75 |
| CDY07345 | Canola | nucleus | 28.9 | 41.61 |
| PGSC0003DMT400072258 | Potato | nucleus | 30.54 | 40.81 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 33.1 | 40.11 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 27.74 | 39.4 |
| Bra004394.1-P | Field mustard | nucleus | 29.37 | 39.38 |
| CDY40941 | Canola | nucleus | 29.37 | 39.38 |
| CDX95921 | Canola | nucleus | 29.14 | 39.06 |
| CDY50737 | Canola | nucleus | 30.77 | 38.37 |
| AT1G69560.2 | Thale cress | nucleus | 30.77 | 38.15 |
| CDY46444 | Canola | nucleus | 31.24 | 37.96 |
| Bra016285.1-P | Field mustard | nucleus | 31.24 | 37.96 |
| PGSC0003DMT400063862 | Potato | nucleus | 26.57 | 37.75 |
| CDY44993 | Canola | nucleus | 30.77 | 37.39 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 30.77 | 37.29 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 30.54 | 37.01 |
| AT1G26780.2 | Thale cress | nucleus | 30.77 | 36.77 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 30.07 | 36.44 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 31.7 | 35.6 |
| KRH50566 | Soybean | nucleus | 36.13 | 35.55 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 36.83 | 34.57 |
| KRH74887 | Soybean | plastid | 37.3 | 34.41 |
| KRH70748 | Soybean | nucleus | 36.13 | 33.19 |
| KRG89586 | Soybean | nucleus | 35.66 | 31.48 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 27.74 | 31.15 |
| VIT_14s0108g01010.t01 | Wine grape | nucleus | 33.57 | 30.25 |
| PGSC0003DMT400020635 | Potato | nucleus | 16.55 | 28.29 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 30.54 | 27.87 |
| OQU80507 | Sorghum | nucleus | 34.03 | 21.38 |
| PGSC0003DMT400008569 | Potato | nucleus | 15.85 | 21.25 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 16.78 | 19.41 |
| PGSC0003DMT400052395 | Potato | nucleus | 16.78 | 19.0 |
| PGSC0003DMT400069921 | Potato | nucleus | 16.55 | 18.98 |
| Os08t0435725-00 | Rice | cytosol | 2.8 | 12.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102591369 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1BKQ6 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400018427 | PGSC:PGSC0003DMG400018427 | EnsemblPlants:PGSC0003DMT400047415 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF697 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002967484 | RefSeq:XP_006355156.2 | SEG:seg |
Description
R2r3-myb transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400018427]
Coordinates
chr5:-:4548155..4550928
Molecular Weight (calculated)
47646.2 Da
IEP (calculated)
7.773
GRAVY (calculated)
-0.793
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTSSSCSC SPMGTSMGMF FADMNSLSIN TPKSLDEGKG RRRGSWDFQF LNKGGSFFSS QSLDEAQNSE ENNGTIDLNA SCFNEENPIT MHSTFNSNNN
101: SSSSGCGGNN GKETENGQSK LCARGHWRPA EDAKLKELVA IYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFS EEEEERLMAA HRLYGNKWAM
201: IARLFPGRTD NAVKNHWHVI MARKYREQSS AYRRRKMGQF VYRRSTTTVV EEAENSSGQN SVNHFAGTCS MKMNNDGPNG WVVYGPNGSP HMAASAGEAA
301: ATPSSTNNVP LYSPYSPFCA PPFDSLPAGH CGNEMMNILN QQAGRSWDRQ REITHQHHQH SSNSLMMMNS MQQDQSQYVL QFPYVAQISS SSTEQGLVKE
401: DKRSNNNSDN TTIAPPTPPF IDFLGVGAT
101: SSSSGCGGNN GKETENGQSK LCARGHWRPA EDAKLKELVA IYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFS EEEEERLMAA HRLYGNKWAM
201: IARLFPGRTD NAVKNHWHVI MARKYREQSS AYRRRKMGQF VYRRSTTTVV EEAENSSGQN SVNHFAGTCS MKMNNDGPNG WVVYGPNGSP HMAASAGEAA
301: ATPSSTNNVP LYSPYSPFCA PPFDSLPAGH CGNEMMNILN QQAGRSWDRQ REITHQHHQH SSNSLMMMNS MQQDQSQYVL QFPYVAQISS SSTEQGLVKE
401: DKRSNNNSDN TTIAPPTPPF IDFLGVGAT
001: MEMVHADVAS LSITPCFPSS LSSSSHHHYN QQQHCIMSED QHHSMDQTTS SDYFSLNIDN AQHLRSYYTS HREEDMNPNL SDYSNCNKKD TTVYRSCGHS
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
101: SKASVSRGHW RPAEDTKLKE LVAVYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL MQAHRLYGNK WAMIARLFPG RTDNSVKNHW
201: HVIMARKFRE QSSSYRRRKT MVSLKPLINP NPHIFNDFDP TRLALTHLAS SDHKQLMLPV PCFPGYDHEN ESPLMVDMFE TQMMVGDYIA WTQEATTFDF
301: LNQTGKSEIF ERINEEKKPP FFDFLGLGTV
Arabidopsis Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.