Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g079360.1.1 | Tomato | nucleus | 98.01 | 97.62 |
| VIT_18s0001g11170.t01 | Wine grape | nucleus | 62.95 | 69.0 |
| KRH61246 | Soybean | nucleus | 54.18 | 64.76 |
| KRH37830 | Soybean | nucleus | 35.86 | 63.38 |
| KRH51945 | Soybean | nucleus | 55.38 | 62.9 |
| KRH05732 | Soybean | nucleus | 50.2 | 51.01 |
| PGSC0003DMT400008569 | Potato | nucleus | 42.23 | 33.12 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 42.23 | 28.57 |
| PGSC0003DMT400052395 | Potato | nucleus | 37.45 | 24.8 |
| PGSC0003DMT400079714 | Potato | nucleus | 23.51 | 24.18 |
| PGSC0003DMT400069921 | Potato | nucleus | 33.86 | 22.73 |
| PGSC0003DMT400063862 | Potato | nucleus | 25.5 | 21.19 |
| PGSC0003DMT400072258 | Potato | nucleus | 25.5 | 19.94 |
| PGSC0003DMT400047415 | Potato | nucleus | 28.29 | 16.55 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | ProteinID:AAG08961 | ProteinID:AAG08961.1 | EMBL:AF122053 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1ADU4 |
| InterPro:Myb_dom | PFAM:PF13921 | EnsemblPlantsGene:PGSC0003DMG400007994 | PGSC:PGSC0003DMG400007994 | EnsemblPlants:PGSC0003DMT400020635 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF611 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00029647A0 |
| SEG:seg | : | : | : | : | : |
Description
Tuber-specific and sucrose-responsive element binding factor [Source:PGSC_GENE;Acc:PGSC0003DMG400007994]
Coordinates
chr4:+:68721298..68722349
Molecular Weight (calculated)
27847.3 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.788
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFFNRCSTS SSSSESSSSE SSLSGKNPNK SERIKGPWSA EEDKILTKLV ERYGARNWSL ISKYIKGRSG KSCRLRWCNQ LSPNVEHRPF SPAEDEAILA
101: AHAKYGNRWA TIARLLPGRT DNAVKNHWNS TLKRRYQQLI QQQNQNPIVF SDVKINGSGS GSGSGFGSCM EYLNVDESPK GNNNNNYAVT NNCSGEFDDP
201: MTTLSLAPPG MGGDELPEKK TESFPEGFWD VMRGVIAREV REYVASTGFP N
101: AHAKYGNRWA TIARLLPGRT DNAVKNHWNS TLKRRYQQLI QQQNQNPIVF SDVKINGSGS GSGSGFGSCM EYLNVDESPK GNNNNNYAVT NNCSGEFDDP
201: MTTLSLAPPG MGGDELPEKK TESFPEGFWD VMRGVIAREV REYVASTGFP N
001: MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
101: STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED
201: PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV
301: E
Arabidopsis Description
MYB77Transcription factor MYB77 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.