CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61246	Soybean	nucleus	83.71	88.1
KRH37830	Soybean	nucleus	48.87	76.06
VIT_18s0001g11170.t01	Wine grape	nucleus	63.35	61.14
PGSC0003DMT400020635	Potato	nucleus	62.9	55.38
Solyc04g079360.1.1	Tomato	nucleus	62.44	54.76
KRH05732	Soybean	nucleus	61.09	54.66
KRH61351	Soybean	nucleus	44.34	37.84
KRH14928	Soybean	nucleus	40.72	37.82
KRH73284	Soybean	nucleus	40.27	36.03
KRH05621	Soybean	nucleus	42.99	35.45
KRH15420	Soybean	nucleus	43.44	35.16
KRH28419	Soybean	nucleus	46.15	34.34
KRH57983	Soybean	nucleus	45.7	34.24
KRH77058	Soybean	nucleus	45.7	33.11
KRG94450	Soybean	nucleus	19.91	27.85
KRG88785	Soybean	nucleus	41.18	25.85
KRH38975	Soybean	nucleus	27.6	25.74
KRH75766	Soybean	nucleus	40.72	25.71
KRH09502	Soybean	nucleus	27.15	25.64
KRH15016	Soybean	nucleus	39.37	22.14
KRH15916	Soybean	nucleus	23.53	21.49
KRH73115	Soybean	nucleus	34.84	19.3
KRH53362	Soybean	nucleus	28.51	19.03
KRH64569	Soybean	nucleus	28.96	18.93
KRG94926	Soybean	nucleus	29.86	17.46
KRH64970	Soybean	nucleus	29.41	16.05
KRH50566	Soybean	nucleus	30.77	15.6
KRH74887	Soybean	plastid	31.22	14.84
KRH70748	Soybean	nucleus	30.32	14.35
KRG89586	Soybean	nucleus	30.32	13.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:778051	EMBL:ACUP02003398	EMBL:DQ822913	EnsemblPlantsGene:GLYMA_06G036800
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KRH51945	ProteinID:KRH51945
ProteinID:KRH51945.1	EMBL:KT031192	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF611	UniProt:Q0PJI9	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000DBD8B5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:2820598..2822127

Molecular Weight (calculated)

24514.2 Da

IEP (calculated)

7.585

GRAVY (calculated)

-0.744

Length

221 amino acids

Sequence
(BLAST)

001: MEATNRSSSS TSSSSDCCSS ESNPNKPDRI KGPWSAEEDR ILTGLVERYG PRNWSLISRY IKGRSGKSCR LRWCNQLSPA VEHRPFSAQE DDTIIAAHAQ
101: YGNRWATIAR LLPGRTDNAV KNHWNSTLKR RAKGININVN HANNEVAASS SAPSRHFDFE DDPLTALTLA PPGIANGTVA EDAVPDHRAS PEGFWDMMRD
201: VIAREVREYV SSNFSDNSGF H

Best Arabidopsis Sequence Match ( AT2G23290.1 )
(BLAST)

001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE

Arabidopsis Description

AtMYB70At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.