CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70748	Soybean	nucleus	88.82	88.44
KRH50566	Soybean	nucleus	46.45	49.54
VIT_01s0026g02600.t01	Wine grape	nucleus	48.6	49.45
Os08t0435700-00	Rice	nucleus	25.81	46.51
KRG89586	Soybean	nucleus	48.39	46.3
KRH09502	Soybean	nucleus	22.8	45.3
GSMUA_Achr6P02580_001	Banana	nucleus	33.76	44.35
KRH38975	Soybean	nucleus	22.58	44.3
GSMUA_Achr5P23290_001	Banana	nucleus	28.39	43.71
Bra003995.1-P	Field mustard	nucleus	27.53	43.1
CDY07345	Canola	nucleus	27.53	42.95
CDY67868	Canola	nucleus	27.31	42.62
KRG94450	Soybean	nucleus	14.19	41.77
AT1G69560.2	Thale cress	nucleus	30.54	41.04
Bra016285.1-P	Field mustard	nucleus	30.54	40.23
CDY46444	Canola	nucleus	30.54	40.23
Bra004394.1-P	Field mustard	nucleus	27.53	40.0
CDX95921	Canola	nucleus	27.53	40.0
CDY40941	Canola	nucleus	27.53	40.0
CDY44993	Canola	nucleus	30.11	39.66
CDY50737	Canola	nucleus	29.03	39.24
KRH37830	Soybean	nucleus	11.83	38.73
TraesCS3B01G473600.1	Wheat	nucleus	29.46	38.7
AT1G26780.2	Thale cress	nucleus	29.68	38.44
TraesCS3A01G439500.1	Wheat	nucleus	29.03	38.14
TraesCS3D01G432300.2	Wheat	nucleus	28.82	37.85
Solyc05g007870.1.1	Tomato	nucleus	33.76	37.65
PGSC0003DMT400047415	Potato	nucleus	34.41	37.3
KRH53362	Soybean	nucleus	26.24	36.86
KRG94926	Soybean	nucleus	29.25	35.98
Zm00001d032194_P002	Maize	nucleus, plastid	29.46	35.86
KRH64569	Soybean	nucleus	25.81	35.5
KRH15916	Soybean	nucleus	18.06	34.71
KRH64970	Soybean	nucleus	29.68	34.07
KRH61246	Soybean	nucleus	14.84	32.86
HORVU3Hr1G096010.6	Barley	nucleus	26.24	31.94
KRH51945	Soybean	nucleus	14.84	31.22
GSMUA_Achr7P18390_001	Banana	nucleus, plastid	29.25	28.94
KRH15420	Soybean	nucleus	16.34	27.84
KRH61351	Soybean	nucleus	15.48	27.8
KRH05621	Soybean	nucleus	15.91	27.61
KRH05732	Soybean	nucleus	13.98	26.32
KRH14928	Soybean	nucleus	12.9	25.21
KRH28419	Soybean	nucleus	15.91	24.92
KRH57983	Soybean	nucleus	15.7	24.75
KRH77058	Soybean	nucleus	15.7	23.93
KRH73284	Soybean	nucleus	12.69	23.89
KRH75766	Soybean	nucleus	16.99	22.57
KRG88785	Soybean	nucleus	16.77	22.16
OQU80507	Sorghum	nucleus	30.54	20.79
KRH15016	Soybean	nucleus	16.56	19.59
KRH73115	Soybean	nucleus	15.7	18.3
Os08t0435725-00	Rice	cytosol	3.23	15.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100776292	MapMan:15.5.2.1	EMBL:ACUP02000084	EnsemblPlantsGene:GLYMA_01G049600	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7K1V8	EnsemblPlants:KRH74887	ProteinID:KRH74887
ProteinID:KRH74887.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF473
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00023BB03E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:5814082..5816546

Molecular Weight (calculated)

51622.6 Da

IEP (calculated)

6.971

GRAVY (calculated)

-0.752

Length

465 amino acids

Sequence
(BLAST)

001: MASSKCCMIS PQQNQNAPTC YPSPIGVVFA DMMGSLSLAT VSNNASSSQE SNVYGYGYGY ASGVGNGSTR WSFPFMREFL SSNFEDCSDL VGAGESNNSN
101: EKTNHNNGKF SEEESNPNEN HANGKEVDSG HSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF NQLDPRINRR AFSEEEEERL
201: MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRM SQSVHRRVEQ NPTFVCSSSR DNASTTEQEP EPSPSYYPNL IHHGVALTNN
301: MASFPPFHGV AACNGVVVEF GSNGSPQNMT SGREAMPNTT HVGLSAQAQQ QAPFDFFSGG GSNDIVLESI SHMRSRERTN GSHNHHCQLS GCYPHYPQQY
401: LMAMQQQLDN NNNFYSFLNS SPAASTAREP SSSPCVAEIR DKVENSDPPD GVPPPFFDFL GVGAT

Best Arabidopsis Sequence Match ( AT1G69560.2 )
(BLAST)

001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.