Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003995.1-P | Field mustard | nucleus | 62.72 | 73.06 |
| CDY67868 | Canola | nucleus | 62.72 | 72.82 |
| CDY07345 | Canola | nucleus | 62.72 | 72.82 |
| CDY40941 | Canola | nucleus | 64.74 | 70.0 |
| Bra004394.1-P | Field mustard | nucleus | 64.74 | 70.0 |
| CDX95921 | Canola | nucleus | 64.16 | 69.38 |
| AT1G26780.2 | Thale cress | nucleus | 52.6 | 50.7 |
| AT5G39700.1 | Thale cress | nucleus | 23.41 | 42.63 |
| AT1G73410.1 | Thale cress | nucleus | 29.48 | 41.98 |
| Os08t0435700-00 | Rice | nucleus | 31.21 | 41.86 |
| AT1G17950.1 | Thale cress | nucleus | 29.48 | 40.96 |
| AT4G33450.1 | Thale cress | nucleus | 27.17 | 37.6 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 31.79 | 36.42 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 36.99 | 36.16 |
| AT3G29020.2 | Thale cress | nucleus | 30.92 | 35.08 |
| AT5G17800.1 | Thale cress | nucleus | 31.5 | 33.75 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 32.95 | 32.2 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 32.95 | 32.2 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 42.49 | 32.17 |
| KRH50566 | Soybean | nucleus | 40.46 | 32.11 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 32.66 | 31.92 |
| Solyc05g007870.1.1 | Tomato | nucleus | 38.15 | 31.65 |
| PGSC0003DMT400047415 | Potato | nucleus | 38.15 | 30.77 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 33.81 | 30.63 |
| KRH74887 | Soybean | plastid | 41.04 | 30.54 |
| KRH70748 | Soybean | nucleus | 40.75 | 30.19 |
| KRG89586 | Soybean | nucleus | 40.75 | 29.01 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 31.21 | 28.27 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 32.08 | 23.62 |
| AT3G50060.1 | Thale cress | nucleus | 19.94 | 22.92 |
| AT5G67300.1 | Thale cress | nucleus | 19.94 | 22.62 |
| AT2G23290.1 | Thale cress | nucleus | 18.21 | 20.39 |
| AT4G37260.1 | Thale cress | nucleus | 18.79 | 20.31 |
| AT2G39880.1 | Thale cress | nucleus | 20.81 | 19.62 |
| AT3G09230.1 | Thale cress | nucleus | 20.23 | 17.81 |
| AT3G55730.1 | Thale cress | nucleus | 20.23 | 17.54 |
| OQU80507 | Sorghum | nucleus | 34.39 | 17.42 |
| Os08t0435725-00 | Rice | cytosol | 2.02 | 7.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:843292 | UniProt:A0A1P8APT7 | ProteinID:ANM58615.1 | ArrayExpress:AT1G69560 |
| EnsemblPlantsGene:AT1G69560 | RefSeq:AT1G69560 | TAIR:AT1G69560 | RefSeq:AT1G69560-TAIR-G | EnsemblPlants:AT1G69560.2 | Unigene:At.14733 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| Symbol:MYB105 | InterPro:Myb_dom | RefSeq:NP_001321037.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0008491E87 | SEG:seg |
Description
MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
Coordinates
chr1:+:26157702..26159094
Molecular Weight (calculated)
40325.7 Da
IEP (calculated)
7.689
GRAVY (calculated)
-0.703
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.