CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89586	Soybean	nucleus	88.76	79.63
VIT_01s0026g02600.t01	Wine grape	nucleus	58.26	55.58
KRH74887	Soybean	plastid	49.54	46.45
KRH09502	Soybean	nucleus	24.77	46.15
KRH38975	Soybean	nucleus	25.0	45.99
KRH70748	Soybean	nucleus	48.62	45.4
Os08t0435700-00	Rice	nucleus	26.83	45.35
KRG94450	Soybean	nucleus	16.28	44.94
GSMUA_Achr6P02580_001	Banana	nucleus	36.01	44.35
GSMUA_Achr5P23290_001	Banana	nucleus	30.28	43.71
CDY67868	Canola	nucleus	29.59	43.29
Bra003995.1-P	Field mustard	nucleus	29.36	43.1
CDY07345	Canola	nucleus	29.36	42.95
CDY40941	Canola	nucleus	31.42	42.81
CDX95921	Canola	nucleus	31.42	42.81
Bra004394.1-P	Field mustard	nucleus	31.42	42.81
AT1G69560.2	Thale cress	nucleus	32.11	40.46
CDY50737	Canola	nucleus	31.65	40.12
AT1G26780.2	Thale cress	nucleus	32.34	39.28
TraesCS3B01G473600.1	Wheat	nucleus	31.88	39.27
CDY46444	Canola	nucleus	31.65	39.09
CDY44993	Canola	nucleus	31.65	39.09
Bra016285.1-P	Field mustard	nucleus	31.65	39.09
TraesCS3A01G439500.1	Wheat	nucleus	31.42	38.7
TraesCS3D01G432300.2	Wheat	nucleus	30.96	38.14
KRH37830	Soybean	nucleus	12.39	38.03
KRG94926	Soybean	nucleus	32.57	37.57
Solyc05g007870.1.1	Tomato	nucleus	35.32	36.93
Zm00001d032194_P002	Maize	nucleus, plastid	31.88	36.39
PGSC0003DMT400047415	Potato	nucleus	35.55	36.13
KRH64970	Soybean	nucleus	33.26	35.8
KRH15916	Soybean	nucleus	19.27	34.71
KRH53362	Soybean	nucleus	26.15	34.44
KRH64569	Soybean	nucleus	25.92	33.43
HORVU3Hr1G096010.6	Barley	nucleus	27.98	31.94
KRH61246	Soybean	nucleus	15.37	31.9
KRH51945	Soybean	nucleus	15.6	30.77
GSMUA_Achr7P18390_001	Banana	nucleus, plastid	31.88	29.57
KRH61351	Soybean	nucleus	16.74	28.19
KRH15420	Soybean	nucleus	17.43	27.84
KRH05621	Soybean	nucleus	16.97	27.61
KRH05732	Soybean	nucleus	15.6	27.53
KRH14928	Soybean	nucleus	14.22	26.05
KRH73284	Soybean	nucleus	13.99	24.7
KRH28419	Soybean	nucleus	16.51	24.24
KRH57983	Soybean	nucleus	16.05	23.73
KRH77058	Soybean	nucleus	16.28	23.28
KRG88785	Soybean	nucleus	17.66	21.88
KRH75766	Soybean	nucleus	17.43	21.71
OQU80507	Sorghum	nucleus	32.8	20.94
KRH15016	Soybean	nucleus	17.66	19.59
KRH73115	Soybean	nucleus	16.51	18.05
Os08t0435725-00	Rice	cytosol	3.9	17.0

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100810632	MapMan:15.5.2.1	EMBL:ACUP02004705	EnsemblPlantsGene:GLYMA_07G228700	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7L3D6	EnsemblPlants:KRH50566	ProteinID:KRH50566
ProteinID:KRH50566.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF473
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00023C5E89	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:40813834..40816411

Molecular Weight (calculated)

48355.7 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.734

Length

436 amino acids

Sequence
(BLAST)

001: MGMVYADMDS LSLCSNYGVV SSHQDNCYVS NGGTNWGFPF MRECPNFEDH PNNSDDVAEE GKGSYSSGED SDKVNHNANN FNDENSPNEN SNSGGSGHSK
101: LCARGHWRPA EDSKLKELVA LYGPQNWNLI AEKLEGRSGK SCRLRWFNQL DPRINRRAFS EEEEERLMQA HRIYGNKWAM IARLFPGRTD NAVKNHWHVI
201: MARKYREQSS AYRRRLSQSS SVYRRVEELN TTTTTSSTLV SRNTAAAEQQ PPPPYCLNLP NNGGLANNIN MPSSPYAATP FHGGVVAVAP SSGVEFGLLN
301: GSPHMTAAKE AFSTPKLVPH IALYPQQTPL DFFSGVRSSN DMVGEYFGQN DHHQPSFGFN PQYPQYVMLM QQHQQNNHNY GFSNSTAQIL GHSEASLSSV
401: AAEHRDHQNV SSDQCPPDAT TTIPPPFIDF LGVGAT

Best Arabidopsis Sequence Match ( AT1G69560.2 )
(BLAST)

001: MMFKVIFNIC SSPPMRMEMV HADVASLSIT PCFPSSLSSS SHHHYNQQQH CIMSEDQHHS MDQTTSSDYF SLNIDNAQHL RSYYTSHREE DMNPNLSDYS
101: NCNKKDTTVY RSCGHSSKAS VSRGHWRPAE DTKLKELVAV YGPQNWNLIA EKLQGRSGKS CRLRWFNQLD PRINRRAFTE EEEERLMQAH RLYGNKWAMI
201: ARLFPGRTDN SVKNHWHVIM ARKFREQSSS YRRRKTMVSL KPLINPNPHI FNDFDPTRLA LTHLASSDHK QLMLPVPCFP GYDHENESPL MVDMFETQMM
301: VGDYIAWTQE ATTFDFLNQT GKSEIFERIN EEKKPPFFDF LGLGTV

Arabidopsis Description

MYB105myb domain protein 105 [Source:TAIR;Acc:AT1G69560]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.