Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016285.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY44993 | Canola | nucleus | 96.32 | 96.32 |
| CDY50737 | Canola | nucleus | 83.29 | 85.47 |
| AT1G26780.2 | Thale cress | nucleus | 83.29 | 81.89 |
| CDY67868 | Canola | nucleus | 49.86 | 59.06 |
| CDY07345 | Canola | nucleus | 49.29 | 58.39 |
| CDY40941 | Canola | nucleus | 50.14 | 55.31 |
| CDX95921 | Canola | nucleus | 49.86 | 55.0 |
| CDY35992 | Canola | nucleus | 23.8 | 53.5 |
| CDY21728 | Canola | nucleus | 23.8 | 53.5 |
| CDX83880 | Canola | nucleus | 24.08 | 46.7 |
| CDX96475 | Canola | nucleus | 28.05 | 43.42 |
| CDX72988 | Canola | nucleus | 27.76 | 43.36 |
| CDX82074 | Canola | nucleus | 28.05 | 42.49 |
| CDY58312 | Canola | nucleus | 28.05 | 42.31 |
| Os08t0435700-00 | Rice | nucleus | 30.88 | 42.25 |
| CDX96742 | Canola | nucleus | 27.48 | 40.08 |
| CDX81853 | Canola | nucleus | 28.05 | 40.08 |
| CDY21727 | Canola | nucleus | 27.76 | 39.04 |
| CDY44415 | Canola | nucleus | 28.05 | 37.93 |
| CDY71713 | Canola | nucleus | 24.65 | 37.83 |
| CDY28302 | Canola | nucleus | 25.78 | 36.26 |
| GSMUA_Achr6P02580_001 | Banana | nucleus | 36.26 | 36.16 |
| GSMUA_Achr5P23290_001 | Banana | nucleus | 30.88 | 36.09 |
| CDX75353 | Canola | nucleus | 25.5 | 35.86 |
| CDX68977 | Canola | nucleus | 25.21 | 35.6 |
| CDY30264 | Canola | nucleus | 26.06 | 35.38 |
| CDX72405 | Canola | nucleus | 24.08 | 35.27 |
| CDY16884 | Canola | nucleus | 30.88 | 34.94 |
| CDX85443 | Canola | nucleus | 30.03 | 34.53 |
| CDY02687 | Canola | nucleus | 30.31 | 34.52 |
| CDY46114 | Canola | nucleus | 23.51 | 34.44 |
| CDY38460 | Canola | nucleus | 31.16 | 33.95 |
| CDY69058 | Canola | nucleus | 25.21 | 33.71 |
| CDY20004 | Canola | nucleus | 27.2 | 33.45 |
| CDY67808 | Canola | nucleus | 15.01 | 33.33 |
| TraesCS3B01G473600.1 | Wheat | nucleus | 33.43 | 33.33 |
| CDX83109 | Canola | nucleus | 15.3 | 33.33 |
| CDY66025 | Canola | nucleus | 26.91 | 32.99 |
| TraesCS3D01G432300.2 | Wheat | nucleus | 32.58 | 32.49 |
| TraesCS3A01G439500.1 | Wheat | nucleus | 32.58 | 32.49 |
| CDX78761 | Canola | nucleus | 28.61 | 32.27 |
| CDX70776 | Canola | nucleus | 28.61 | 32.27 |
| Solyc05g007870.1.1 | Tomato | nucleus | 37.96 | 32.13 |
| VIT_01s0026g02600.t01 | Wine grape | nucleus | 41.36 | 31.95 |
| Zm00001d032194_P002 | Maize | nucleus, plastid | 34.28 | 31.68 |
| KRH50566 | Soybean | nucleus | 39.09 | 31.65 |
| PGSC0003DMT400047415 | Potato | nucleus | 37.96 | 31.24 |
| CDY66170 | Canola | nucleus | 27.2 | 30.57 |
| KRH74887 | Soybean | plastid | 40.23 | 30.54 |
| KRH70748 | Soybean | nucleus | 39.66 | 29.98 |
| HORVU3Hr1G096010.6 | Barley | nucleus | 32.01 | 29.58 |
| KRG89586 | Soybean | nucleus | 39.38 | 28.6 |
| CDX74436 | Canola | nucleus | 26.35 | 25.76 |
| CDY12830 | Canola | nucleus | 18.13 | 25.3 |
| GSMUA_Achr7P18390_001 | Banana | nucleus, plastid | 33.14 | 24.89 |
| CDY01420 | Canola | nucleus | 18.13 | 24.33 |
| CDY30608 | Canola | nucleus | 18.13 | 24.15 |
| CDY57355 | Canola | nucleus | 18.98 | 24.1 |
| CDY29542 | Canola | nucleus | 17.28 | 23.02 |
| CDX72621 | Canola | nucleus | 17.28 | 23.02 |
| CDY23023 | Canola | nucleus | 18.41 | 22.41 |
| CDY02098 | Canola | nucleus | 18.41 | 22.18 |
| CDY22442 | Canola | nucleus | 17.28 | 22.18 |
| CDX75635 | Canola | nucleus | 18.7 | 22.07 |
| CDY38933 | Canola | nucleus | 18.13 | 21.92 |
| CDX69287 | Canola | nucleus | 18.7 | 21.57 |
| CDX89554 | Canola | nucleus | 17.85 | 21.5 |
| CDY44045 | Canola | nucleus | 17.28 | 21.4 |
| CDY07907 | Canola | nucleus | 18.98 | 20.18 |
| CDX73963 | Canola | nucleus | 18.98 | 20.0 |
| CDY27271 | Canola | nucleus | 20.68 | 19.57 |
| CDX72208 | Canola | nucleus | 20.4 | 19.57 |
| CDX68566 | Canola | nucleus | 17.28 | 19.43 |
| CDY20494 | Canola | nucleus | 19.83 | 19.02 |
| CDX74825 | Canola | nucleus | 20.96 | 18.45 |
| CDY43567 | Canola | nucleus | 11.05 | 17.97 |
| OQU80507 | Sorghum | nucleus | 34.56 | 17.86 |
| CDY70901 | Canola | nucleus | 10.48 | 12.94 |
| CDY70773 | Canola | nucleus | 10.48 | 12.94 |
| Os08t0435725-00 | Rice | cytosol | 2.27 | 8.0 |
| CDX83108 | Canola | cytosol | 0.57 | 5.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078IAW0 | UniProt:A0A078IAW0 | EnsemblPlants:CDY46444 | ProteinID:CDY46444 |
| ProteinID:CDY46444.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00083998001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF473 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002546028 | SEG:seg |
Description
BnaA08g19860DBnaA08g19860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAW0]
Coordinates
chrLK032666:-:170609..172053
Molecular Weight (calculated)
40822.6 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.879
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MFISEKQRWT DEVAAARREA SSWDFPFNDI NVQHHRRCNT SHEFDILKSP LGDNVEGSNN HNPNYSNNES GKKETTDSGQ SWSSSSSKPS VLGRGHWRPA
101: EDVKLKELVA IYGPQNWNLI AEKLQGRSGK SCRLRWFNQL DPRINRRAFT EDEEERLMQA HRLYGNKWAM IARLFPGRTD NSVKNHWHVI MARKYREHSS
201: AYRRRKLMIN NPLKPQLSNH PSPNPNHHSF ISTHHYFTQP FHEFNLTHHL VNNASITPDH NQLVLPIHCF QGYESNETPM VVSMFGNQIM GGDNVDVMSE
301: GLYEYPYIDS TSHEKGVPNE PMSWIGMEGE DEEVVEKAKQ QPHFFDFLGL GTA
101: EDVKLKELVA IYGPQNWNLI AEKLQGRSGK SCRLRWFNQL DPRINRRAFT EDEEERLMQA HRLYGNKWAM IARLFPGRTD NSVKNHWHVI MARKYREHSS
201: AYRRRKLMIN NPLKPQLSNH PSPNPNHHSF ISTHHYFTQP FHEFNLTHHL VNNASITPDH NQLVLPIHCF QGYESNETPM VVSMFGNQIM GGDNVDVMSE
301: GLYEYPYIDS TSHEKGVPNE PMSWIGMEGE DEEVVEKAKQ QPHFFDFLGL GTA
001: MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
101: WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR
201: EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN
301: VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF FDFLGLGTA
Arabidopsis Description
MYB117MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.