Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22442 | Canola | nucleus | 92.63 | 96.0 |
| Bra010593.1-P | Field mustard | nucleus | 100.0 | 93.44 |
| CDX75635 | Canola | nucleus | 89.82 | 85.62 |
| CDX69287 | Canola | nucleus | 85.61 | 79.74 |
| CDX72621 | Canola | nucleus | 72.98 | 78.49 |
| CDY29542 | Canola | nucleus | 72.28 | 77.74 |
| AT4G37260.1 | Thale cress | nucleus | 86.32 | 76.88 |
| CDY38933 | Canola | nucleus | 69.12 | 67.47 |
| CDX89554 | Canola | nucleus | 68.77 | 66.89 |
| CDX83109 | Canola | nucleus | 32.28 | 56.79 |
| KRH57983 | Soybean | nucleus | 55.79 | 53.9 |
| KRH28419 | Soybean | nucleus | 56.14 | 53.87 |
| CDY12830 | Canola | nucleus | 47.37 | 53.36 |
| KRH77058 | Soybean | nucleus | 56.84 | 53.11 |
| CDY01420 | Canola | nucleus | 48.77 | 52.85 |
| CDY30608 | Canola | nucleus | 48.07 | 51.7 |
| CDY57355 | Canola | nucleus | 50.18 | 51.44 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 56.14 | 51.28 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 56.14 | 51.12 |
| CDY23023 | Canola | nucleus | 50.53 | 49.66 |
| CDY02098 | Canola | nucleus | 49.82 | 48.46 |
| CDY43567 | Canola | nucleus | 36.49 | 47.93 |
| Zm00001d005300_P001 | Maize | nucleus | 47.02 | 47.02 |
| Os09t0106700-01 | Rice | nucleus | 50.88 | 45.45 |
| Solyc02g092930.1.1 | Tomato | nucleus | 56.49 | 44.6 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 57.89 | 44.47 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 51.93 | 44.18 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 51.58 | 43.75 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 51.58 | 42.86 |
| Zm00001d019712_P001 | Maize | nucleus | 51.58 | 42.61 |
| EER98550 | Sorghum | nucleus | 52.28 | 40.71 |
| CDX68566 | Canola | nucleus | 41.75 | 37.9 |
| HORVU5Hr1G049880.1 | Barley | plastid | 50.88 | 34.2 |
| CDY35992 | Canola | nucleus | 18.6 | 33.76 |
| CDX83108 | Canola | cytosol | 4.56 | 33.33 |
| CDY21728 | Canola | nucleus | 18.25 | 33.12 |
| CDX83880 | Canola | nucleus | 18.6 | 29.12 |
| CDY07907 | Canola | nucleus | 31.58 | 27.11 |
| CDX73963 | Canola | nucleus | 31.58 | 26.87 |
| CDX96475 | Canola | nucleus | 20.7 | 25.88 |
| CDX72988 | Canola | nucleus | 20.35 | 25.66 |
| CDY71713 | Canola | nucleus | 20.35 | 25.22 |
| CDY58312 | Canola | nucleus | 20.7 | 25.21 |
| CDX82074 | Canola | nucleus | 20.35 | 24.89 |
| CDY44415 | Canola | nucleus | 22.46 | 24.52 |
| CDX72405 | Canola | nucleus | 20.7 | 24.48 |
| CDY20494 | Canola | nucleus | 31.58 | 24.46 |
| CDX72208 | Canola | nucleus | 31.58 | 24.46 |
| CDY27271 | Canola | nucleus | 31.93 | 24.4 |
| CDY46114 | Canola | nucleus | 20.35 | 24.07 |
| CDX68977 | Canola | nucleus | 21.05 | 24.0 |
| CDY28302 | Canola | nucleus | 21.05 | 23.9 |
| CDX75353 | Canola | nucleus | 21.05 | 23.9 |
| CDY30264 | Canola | nucleus | 21.75 | 23.85 |
| CDX96742 | Canola | nucleus | 19.3 | 22.73 |
| CDY21727 | Canola | nucleus | 20.0 | 22.71 |
| CDX81853 | Canola | nucleus | 19.65 | 22.67 |
| CDY67808 | Canola | nucleus | 12.63 | 22.64 |
| CDY16884 | Canola | nucleus | 24.56 | 22.44 |
| CDY20004 | Canola | nucleus | 22.46 | 22.3 |
| CDY66025 | Canola | nucleus | 22.46 | 22.22 |
| CDX74825 | Canola | nucleus | 31.23 | 22.19 |
| CDY69058 | Canola | nucleus | 20.35 | 21.97 |
| CDY38460 | Canola | nucleus | 24.91 | 21.91 |
| CDX78761 | Canola | nucleus | 23.86 | 21.73 |
| CDX70776 | Canola | nucleus | 23.86 | 21.73 |
| CDX85443 | Canola | nucleus | 23.16 | 21.5 |
| CDY07345 | Canola | nucleus | 22.11 | 21.14 |
| CDY02687 | Canola | nucleus | 22.81 | 20.97 |
| CDY67868 | Canola | nucleus | 21.75 | 20.81 |
| CDY66170 | Canola | nucleus | 22.11 | 20.06 |
| CDY70773 | Canola | nucleus | 20.0 | 19.93 |
| CDX95921 | Canola | nucleus | 22.11 | 19.69 |
| CDY70901 | Canola | nucleus | 19.65 | 19.58 |
| CDY40941 | Canola | nucleus | 21.75 | 19.38 |
| CDY50737 | Canola | nucleus | 21.4 | 17.73 |
| CDY46444 | Canola | nucleus | 21.4 | 17.28 |
| CDY44993 | Canola | nucleus | 21.4 | 17.28 |
| CDX74436 | Canola | nucleus | 21.4 | 16.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HZL9 | UniProt:A0A078HZL9 | EnsemblPlants:CDY44045 | ProteinID:CDY44045 |
| ProteinID:CDY44045.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00079456001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF940 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE5682 | SEG:seg |
Description
BnaA08g15610DBnaA08g15610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZL9]
Coordinates
chrLK032577:-:141019..141936
Molecular Weight (calculated)
31544.0 Da
IEP (calculated)
7.974
GRAVY (calculated)
-0.752
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSVRKNME RIKGPWSPEE DELLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFSP EEDETIIRAH ARFGNKWATI SRLLSGRTDN
101: AIKNHWNSTL KRKCNGVASD GYDGNIGEEQ PLKRTASGGG VSTELYMSPR SPSGSDVSEQ SGGGPHVFRS GAVNEMTASS SGEDPPTYLS LSLPWNNRYE
201: TENVRLFPVR KEEVEEEKEM SGFGGEFMTA VQEMIRTEVR SYMADLQRGN IGGGGGGSCM PQSINSRRVG FREFIVNQIG IGKIE
101: AIKNHWNSTL KRKCNGVASD GYDGNIGEEQ PLKRTASGGG VSTELYMSPR SPSGSDVSEQ SGGGPHVFRS GAVNEMTASS SGEDPPTYLS LSLPWNNRYE
201: TENVRLFPVR KEEVEEEKEM SGFGGEFMTA VQEMIRTEVR SYMADLQRGN IGGGGGGSCM PQSINSRRVG FREFIVNQIG IGKIE
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.