Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69287 | Canola | nucleus | 94.65 | 92.48 |
| Bra011749.1-P | Field mustard | nucleus | 99.67 | 90.85 |
| CDY44045 | Canola | nucleus | 85.62 | 89.82 |
| CDY22442 | Canola | nucleus | 81.94 | 89.09 |
| AT4G37260.1 | Thale cress | nucleus | 91.3 | 85.31 |
| CDY29542 | Canola | nucleus | 72.58 | 81.89 |
| CDX72621 | Canola | nucleus | 72.24 | 81.51 |
| CDY38933 | Canola | nucleus | 70.57 | 72.26 |
| CDX89554 | Canola | nucleus | 69.9 | 71.33 |
| KRH28419 | Soybean | nucleus | 56.19 | 56.57 |
| CDX83109 | Canola | nucleus | 30.43 | 56.17 |
| KRH77058 | Soybean | nucleus | 56.86 | 55.74 |
| KRH57983 | Soybean | nucleus | 53.51 | 54.24 |
| CDY12830 | Canola | nucleus | 45.82 | 54.15 |
| CDY30608 | Canola | nucleus | 47.83 | 53.96 |
| CDY01420 | Canola | nucleus | 46.82 | 53.23 |
| VIT_07s0129g01050.t01 | Wine grape | nucleus | 55.18 | 52.88 |
| CDY57355 | Canola | nucleus | 49.16 | 52.88 |
| VIT_18s0001g09850.t01 | Wine grape | nucleus | 54.52 | 52.08 |
| CDY23023 | Canola | nucleus | 48.49 | 50.0 |
| CDY02098 | Canola | nucleus | 47.83 | 48.81 |
| CDY43567 | Canola | nucleus | 34.78 | 47.93 |
| Solyc02g092930.1.1 | Tomato | nucleus | 56.86 | 47.09 |
| PGSC0003DMT400064306 | Potato | mitochondrion, nucleus | 58.19 | 46.9 |
| Zm00001d005300_P001 | Maize | nucleus | 44.15 | 46.32 |
| Os09t0106700-01 | Rice | nucleus | 49.16 | 46.08 |
| TraesCS5B01G157300.1 | Wheat | nucleus | 50.84 | 45.37 |
| TraesCS5A01G159600.1 | Wheat | nucleus | 50.17 | 44.64 |
| TraesCS5D01G164600.1 | Wheat | nucleus | 50.17 | 43.73 |
| Zm00001d019712_P001 | Maize | nucleus | 48.49 | 42.03 |
| EER98550 | Sorghum | nucleus | 48.83 | 39.89 |
| CDX68566 | Canola | nucleus | 40.47 | 38.53 |
| CDX83108 | Canola | cytosol | 4.68 | 35.9 |
| HORVU5Hr1G049880.1 | Barley | plastid | 49.83 | 35.14 |
| CDY35992 | Canola | nucleus | 18.39 | 35.03 |
| CDY21728 | Canola | nucleus | 18.06 | 34.39 |
| CDX83880 | Canola | nucleus | 18.39 | 30.22 |
| CDY07907 | Canola | nucleus | 31.44 | 28.31 |
| CDX73963 | Canola | nucleus | 31.44 | 28.06 |
| CDX96475 | Canola | nucleus | 20.4 | 26.75 |
| CDX72988 | Canola | nucleus | 20.07 | 26.55 |
| CDY71713 | Canola | nucleus | 20.4 | 26.52 |
| CDX72405 | Canola | nucleus | 21.07 | 26.14 |
| CDY20494 | Canola | nucleus | 31.77 | 25.82 |
| CDY46114 | Canola | nucleus | 20.74 | 25.73 |
| CDY58312 | Canola | nucleus | 20.07 | 25.64 |
| CDX82074 | Canola | nucleus | 19.73 | 25.32 |
| CDX72208 | Canola | nucleus | 31.1 | 25.27 |
| CDY27271 | Canola | nucleus | 31.44 | 25.2 |
| CDX68977 | Canola | nucleus | 21.07 | 25.2 |
| CDY28302 | Canola | nucleus | 21.07 | 25.1 |
| CDX75353 | Canola | nucleus | 21.07 | 25.1 |
| CDY44415 | Canola | nucleus | 21.74 | 24.9 |
| CDY30264 | Canola | nucleus | 20.74 | 23.85 |
| CDX96742 | Canola | nucleus | 19.06 | 23.55 |
| CDY21727 | Canola | nucleus | 19.73 | 23.51 |
| CDX81853 | Canola | nucleus | 19.4 | 23.48 |
| CDX74825 | Canola | nucleus | 31.44 | 23.44 |
| CDY16884 | Canola | nucleus | 24.08 | 23.08 |
| CDY20004 | Canola | nucleus | 21.74 | 22.65 |
| CDY67808 | Canola | nucleus | 12.04 | 22.64 |
| CDY38460 | Canola | nucleus | 24.41 | 22.53 |
| CDY69058 | Canola | nucleus | 19.73 | 22.35 |
| CDY66025 | Canola | nucleus | 21.4 | 22.22 |
| CDY07345 | Canola | nucleus | 22.07 | 22.15 |
| CDX78761 | Canola | nucleus | 23.08 | 22.04 |
| CDX70776 | Canola | nucleus | 23.08 | 22.04 |
| CDX85443 | Canola | nucleus | 22.41 | 21.82 |
| CDY67868 | Canola | nucleus | 21.74 | 21.81 |
| CDY02687 | Canola | nucleus | 22.41 | 21.61 |
| CDY40941 | Canola | nucleus | 23.08 | 21.56 |
| CDX95921 | Canola | nucleus | 23.08 | 21.56 |
| CDY66170 | Canola | nucleus | 21.74 | 20.7 |
| CDY70901 | Canola | nucleus | 19.73 | 20.63 |
| CDY70773 | Canola | nucleus | 19.73 | 20.63 |
| CDY50737 | Canola | nucleus | 22.07 | 19.19 |
| CDY46444 | Canola | nucleus | 22.07 | 18.7 |
| CDY44993 | Canola | nucleus | 22.07 | 18.7 |
| CDX74436 | Canola | nucleus | 20.4 | 16.9 |
Protein Annotations
| EnsemblPlants:CDX75635 | EnsemblPlantsGene:GSBRNA2T00121554001 | Gene3D:1.10.10.60 | GO:A0A078CFL0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF691 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX75635 | ProteinID:CDX75635.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDF3F5 | MapMan:15.5.2.1 | : |
Description
BnaA01g00670D
Coordinates
chrLK031804:+:2054485..2055615
Molecular Weight (calculated)
32667.4 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.659
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPSRKNME RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFTA EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSAFTSE GQSCDFGGNG GYDGNLGEEQ PLKRTASGGG VSTGLYMSPG SPSGSDVSEQ SCGVPHVFKP TARSGAVTEV TASTSGEDPP
201: TYLSLSLPWN NRCETETVRL FPVRKEEVEE EKGISGFGGE FMTVVQEMIR TEVRSYMADL QRGNVGGGGG GSCMPQSVNS RRVGFREFIV NQIGIGKME
101: AIKNHWNSTL KRKCSAFTSE GQSCDFGGNG GYDGNLGEEQ PLKRTASGGG VSTGLYMSPG SPSGSDVSEQ SCGVPHVFKP TARSGAVTEV TASTSGEDPP
201: TYLSLSLPWN NRCETETVRL FPVRKEEVEE EKGISGFGGE FMTVVQEMIR TEVRSYMADL QRGNVGGGGG GSCMPQSVNS RRVGFREFIV NQIGIGKME
001: MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
101: AIKNHWNSTL KRKCSVEGQS CDFGGNGGYD GNLGEEQPLK RTASGGGGVS TGLYMSPGSP SGSDVSEQSS GGAHVFKPTV RSEVTASSSG EDPPTYLSLS
201: LPWTDETVRV NEPVQLNQNT VMDGGYTAEL FPVRKEEQVE VEEEEAKGIS GGFGGEFMTV VQEMIRTEVR SYMADLQRGN VGGSSSGGGG GGSCMPQSVN
301: SRRVGFREFI VNQIGIGKME
Arabidopsis Description
MYB73MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.